DRSC/TRiP Functional Genomics Resources

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Protein Alignment toy and ceh-53

DIOPT Version :10

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_500361.3 Gene:ceh-53 / 182467 WormBaseID:WBGene00015651 Length:203 Species:Caenorhabditis elegans


Alignment Length:236 Identity:65/236 - (27%)
Similarity:98/236 - (41%) Gaps:61/236 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 LQFSVEVSHTNSHDSTSDGNSEHNSSGDEDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHY 289
            :||.:.:...:|....|..|||               :|:::|.||:||..|::.||:.|.:..|
 Worm     6 MQFQMVMKECSSSPPQSAQNSE---------------ERRVRRLRTAFSENQLELLEEAFLKCQY 55

  Fly   290 PDVFARERLADKIGLPEARIQVWFSNRRAKWRREEKMRTQRRSADTVDGSGRTSTANNPSGTTAS 354
            |||..||.|..:..|.||||||||.|||||.|:       |:..::.|....|..:|........
 Worm    56 PDVQQRETLGKQTELAEARIQVWFKNRRAKARK-------RQRNESTDSCSTTEESNEEGDADGC 113

  Fly   355 SSVATSNNS-----TPGIVNSAINVAERTSSALVSNSLPEASNGPTVLGGEANTTHTSSESPPLQ 414
            ......|.:     |||             :||.::||     .||      .|:..::.:|||.
 Worm   114 LKKKAKNETTIITWTPG-------------AALFNSSL-----SPT------TTSIPTTPAPPLN 154

  Fly   415 PAAPRLPLNS-----GFNTMYSSIPQPIATMAENYNSSLGS 450
            ....:.|..:     ..||:.:.:.....|.|     |:||
 Worm   155 FICHQNPFYAYNPYRNLNTIPTHLLAATTTAA-----SIGS 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645
COG5576 <253..368 CDD:227863 40/119 (34%)
Homeodomain 267..322 CDD:459649 30/54 (56%)
ceh-53NP_500361.3 Homeodomain 32..81 CDD:459649 25/48 (52%)
Blue background indicates that the domain is not in the aligned region.

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