DRSC/TRiP Functional Genomics Resources

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Protein Alignment toy and Hoxa3

DIOPT Version :9

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_034582.1 Gene:Hoxa3 / 15400 MGIID:96175 Length:443 Species:Mus musculus


Alignment Length:365 Identity:83/365 - (22%)
Similarity:134/365 - (36%) Gaps:104/365 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 PSNTTTAHLTLPPAASVVTSPANLSGQADRDDVQKRELQFSVEV----------SHTNSHDSTSD 242
            |:.|..|    ||..|.|:.|.:.:.........|..|..|..|          |..|:...||.
Mouse   113 PAPTPAA----PPPPSSVSPPQSANSNPTPASTAKSPLLNSPTVGKQIFPWMKESRQNTKQKTSG 173

  Fly   243 GNSEHNSSGDEDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEA 307
            .:|..:.:||:....:...||.    ||::::.|:..|||||....|.....|..:|:.:.|.|.
Mouse   174 SSSGESCAGDKSPPGQASSKRA----RTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTER 234

  Fly   308 RIQVWFSNRRAKWRREEKMRTQRRSADTVDGSGRTSTANNPSGTTASSSVATSNNSTPGIVNSAI 372
            :|::||.|||.|:::::|            |.|..:::...|                       
Mouse   235 QIKIWFQNRRMKYKKDQK------------GKGMLTSSGGQS----------------------- 264

  Fly   373 NVAERTSSALVSNSLPEASNGPTVLGGEANTTHTSSESPPLQPAAP---RLPLNSGFNTMYSSIP 434
                           |..|..|...||..|:.|:...|.|.:|.:|   ..|....:....:|.|
Mouse   265 ---------------PSRSPVPPGAGGYLNSMHSLVNSVPYEPQSPPPFSKPPQGAYGLPPASYP 314

  Fly   435 QPIATMA------ENYNSSLGS---MTPSC------LQQRDAY--PYMFHDPLSLGSPYVSAHHR 482
            .|:.:.|      :.|.:: ||   .||..      ||...:|  |::...|:.:|..||     
Mouse   315 APLPSCAPPPPPQKRYTAA-GSGAGGTPDYDPHAHGLQGNGSYGTPHLQGSPVFVGGSYV----- 373

  Fly   483 NTACNPSAAHQQPPQHGV----YTNSSPMPSSNTGVISAG 518
                .|.:  ...|..|:    :|.|:.|....||.:.:|
Mouse   374 ----EPMS--NSGPLFGLTHLPHTTSAAMDYGGTGPLGSG 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645
COG5576 <253..368 CDD:227863 26/114 (23%)
Homeobox 269..322 CDD:395001 20/52 (38%)
Hoxa3NP_034582.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 74..151 11/41 (27%)
Antp-type hexapeptide 156..161 0/4 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..197 9/37 (24%)
COG5576 <182..309 CDD:227863 40/180 (22%)
Homeobox 196..249 CDD:365835 20/52 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 248..354 27/156 (17%)
DUF4074 378..441 CDD:372548 8/30 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 401..443 3/7 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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