DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment toy and Rax

DIOPT Version :10

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_446130.1 Gene:Rax / 114213 RGDID:620371 Length:342 Species:Rattus norvegicus


Alignment Length:212 Identity:70/212 - (33%)
Similarity:100/212 - (47%) Gaps:43/212 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 KRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAKWRREEKM 326
            |:|.:||||:|:..|:..||:.||::|||||::||.||.|:.|||.|:||||.||||||||:||:
  Rat   134 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 198

  Fly   327 RTQRRSADTVDGSGRTSTANNPSGTTASSSVATSNNSTPGIVNSAINVAERTSSALVSNSLP-EA 390
            ...  |....|....:.:.:.||...|......|.:..||                  ::|| |.
  Rat   199 EVS--SMKLQDSPLLSFSRSPPSSALAPLGGPGSGSGPPG------------------SALPLEP 243

  Fly   391 SNGPTVLGGEANTTHT------------SSESPPLQPAAPRLPLNSGFNTMYSSIPQPIA----- 438
            ..||.:.||.|....:            :|.:|| .|.....||..|...:......|.|     
  Rat   244 WLGPPLPGGGATALQSLPGFGPPGQGLPASYTPP-PPFLNSAPLGPGLQQLGPPPAYPCAPAFGD 307

  Fly   439 --TMAENY--NSSLGSM 451
              ::.|.|  |||:.::
  Rat   308 KFSLEEAYPRNSSIAAL 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645
COG5576 <253..368 CDD:227863 48/105 (46%)
Homeodomain 267..322 CDD:459649 34/54 (63%)
RaxNP_446130.1 Octapeptide motif 33..40
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 49..141 3/6 (50%)
Homeodomain 138..194 CDD:459649 34/55 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 209..295 21/104 (20%)
OAR 316..331 CDD:461067 3/9 (33%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 319..332 2/6 (33%)
Nuclear localization signal. /evidence=ECO:0000255 325..329 70/212 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.