DRSC/TRiP Functional Genomics Resources

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Protein Alignment toy and sia2

DIOPT Version :10

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:XP_002942206.3 Gene:sia2 / 100489935 XenbaseID:XB-GENE-482070 Length:220 Species:Xenopus tropicalis


Alignment Length:105 Identity:38/105 - (36%)
Similarity:51/105 - (48%) Gaps:24/105 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 HDSTSDGNSEHNSSGDEDSQMRLR----------LKRKLQ------------RNRTSFSNEQIDS 279
            ||  .:.|.|..|:.:|.|:.|.|          .|.||:            |.||.:|.||...
 Frog    81 HD--LEPNKESLSTNNEISKGRKRPLYEEEQRESKKPKLEMDHYLPSARTRCRRRTIYSKEQTLF 143

  Fly   280 LEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAK 319
            |:.:|:...|||..:|..:|...|:||.||||||.||||:
 Frog   144 LQDQFDLNPYPDFVSRCHIAKITGIPEPRIQVWFQNRRAR 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645
COG5576 <253..368 CDD:227863 33/89 (37%)
Homeodomain 267..322 CDD:459649 26/53 (49%)
sia2XP_002942206.3 COG5576 69..>183 CDD:227863 37/103 (36%)
Homeodomain 131..184 CDD:459649 26/53 (49%)
Blue background indicates that the domain is not in the aligned region.

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