DRSC/TRiP Functional Genomics Resources

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Protein Alignment toy and pax10

DIOPT Version :10

Sequence 1:NP_001368990.1 Gene:toy / 43833 FlyBaseID:FBgn0019650 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001373372.1 Gene:pax10 / 100192208 ZFINID:ZDB-GENE-081022-10 Length:275 Species:Danio rerio


Alignment Length:390 Identity:135/390 - (34%)
Similarity:171/390 - (43%) Gaps:131/390 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 VYEKLRMFNGQ-TGGWA----WY-PSNT-TTAHLTLPPAASVVTSPANLSG------QADRDDVQ 221
            :|:.|.|.|.| :..|:    || |::| |..|.|   ...|......::|      |.:||:| 
Zfish     1 MYDNLTMLNLQNSSNWSGPNNWYHPADTITPQHGT---DGCVEDLNVQMAGAGEGVVQGERDEV- 61

  Fly   222 KRELQFSVEVSHTNSHDSTSDGNSEHNSSGDEDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFER 286
                                           :|||:.|:||||||||||||:.||||:|||||||
Zfish    62 -------------------------------DDSQLHLQLKRKLQRNRTSFTQEQIDALEKEFER 95

  Fly   287 THYPDVFARERLADKIGLPEARIQVWFSNRRAKWRREEKMRTQRRSADTVDGSGRTSTANNPSGT 351
            |||||||||||||.||.||||||||||||||||||||||:|.||||.    .|...|..:.|..|
Zfish    96 THYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRSG----SSSSCSQTHTPLST 156

  Fly   352 TASSSVATSNNSTPGIVNSAINVAERTSSALVSNSLPEASNGPTVLGGEANTTHTSSESPPLQPA 416
            :.:|.|..|::|     ||:.::..|:.|:|...|.....:....|..::..|: |...||...|
Zfish   157 SFNSPVYHSHHS-----NSSGSMHSRSDSSLSGYSSLSVFSSMQSLPSQSTPTY-SCMLPPSPSA 215

  Fly   417 APRLPLNSGFNTMYSSIPQPIATMAENYNSSLGSMTPSCLQQRDAYPYMFHDPLSLGSPYVSAHH 481
            .|  ||:..|::.|:|                                                 
Zfish   216 LP--PLSRKFDSSYTS------------------------------------------------- 229

  Fly   482 RNTACNPSAAHQQPPQHGVYTNSSPMPSSNTGVISAGVSVPVQISTQNVSDLTG---SNYWPRLQ 543
                     .|..||         |..|:|||.. ||||...|.:.|......|   |.||.|||
Zfish   230 ---------PHLPPP---------PTASANTGFF-AGVSAAGQTAVQGGDQELGQGLSQYWTRLQ 275

  Fly   544  543
            Zfish   276  275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
toyNP_001368990.1 PAX 29..153 CDD:128645
COG5576 <253..368 CDD:227863 77/114 (68%)
Homeodomain 267..322 CDD:459649 49/54 (91%)
pax10NP_001373372.1 Homeodomain 76..131 CDD:459649 49/54 (91%)
Blue background indicates that the domain is not in the aligned region.

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