DRSC/TRiP Functional Genomics Resources

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Protein Alignment PlexA and plxnb2a.3

DIOPT Version :10

Sequence 1:NP_524637.2 Gene:PlexA / 43832 FlyBaseID:FBgn0025741 Length:1945 Species:Drosophila melanogaster
Sequence 2:XP_005164765.1 Gene:plxnb2a.3 / 561237 ZFINID:ZDB-GENE-041210-121 Length:600 Species:Danio rerio


Alignment Length:528 Identity:163/528 - (30%)
Similarity:260/528 - (49%) Gaps:60/528 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 TKLNHLLVDTITGRVFVGGVNRLYQLSPDLELSETVKTGPQNDSVECSILDCPLNAV---RSPTD 134
            |.:|:::.|..|||:::|.||.::||:.:|:......|||:.|:.:|:   .|:.|.   ....|
Zfish    63 TIINNVVQDPQTGRIYLGAVNGIFQLNHNLQEESRADTGPKKDNPQCT---PPITAKCTDAKEMD 124

  Fly   135 NYNKVLLIDRATSRLIACGSLFQGTCTVRNLQNVS----IIEHEVPDAVVANDANSSTVAFIAPG 195
            |:||:||::.|...||.|||||:|.|::.||.:|:    ..:.:.....||:...|.||..:. .
Zfish   125 NFNKLLLVNSANGTLIVCGSLFRGICSLVNLNSVNKPVYYSDTKGEKTWVASTEESVTVVGVI-S 188

  Fly   196 PPQHPVTN----VMYVGVTYTNNSPYRSEIPAVASRSLE---KTKMFQIASSAVTTGTRTFINSY 253
            ..:...||    |..||..|.::...:    .:::|.|:   :..:|:....|.|..|.:|::.|
Zfish   189 YFKDTTTNANLSVFLVGKGYGSSDSSK----LISTRLLQEHGEMDVFENMVEASTVQTSSFVHRY 249

  Fly   254 ARETYFVNYVYGFSSERFSYFLTTQLKHSHHSSPKEYITKLVRICQEDSNYYSYTEIPVEC-ISD 317
            ..:     :.|.|....:.|||   ...|..:|....||.:.|:|:.|.:||||||:.:.| ::.
Zfish   250 LHD-----FRYTFKDNGYIYFL---FSRSPGTSDSRRITFIARLCENDHHYYSYTELQLNCTVNT 306

  Fly   318 AQGGTKFNLVQAGFLGKPSSDLAQSLGIS-IQDDVLFAVFSKGEGNTPTNNSALCIYSLKSIRRK 381
            .|....||.|||.:|.||...|||::..| :.|.|||.|||..|.:   ..||||:|.|.||..:
Zfish   307 EQQENTFNKVQAAYLAKPGKVLAQNIVPSNLNDKVLFGVFSADEAD---GRSALCMYPLSSINAR 368

  Fly   382 FMQNIKSCFNGSGMRG-------LDFISPSMPCVLTK--LQTIGEDFCGLD-VNSPLGG--ETPI 434
            |.:.|:||:.|..:..       ..:.|.:.....||  ...:....||.: :.|||..  |..:
Zfish   369 FEEVIESCYTGEVLEDDKPKTVYSPYNSKNEAICRTKRDKNMVKAYICGAEFLPSPLASKPEYAL 433

  Fly   435 TSVPVAMFNTKLTSVAATSTSGYTVVFVGTSDGFLKKVVIES------SSIANEYASFAVDLGSE 493
            ...|:...|..||:||....:.:||.|:|||...:.||.::.      :.|..|:...||     
Zfish   434 AVKPIYTGNDMLTAVAVAVENEHTVAFLGTSGADVLKVHLDPNHTDFYNRIPEEHTEGAV----- 493

  Fly   494 INRDMQFDNQNLYIYVMSKTKVSKVKVFDCSDYKTCGDCLGARDPYCGWCSLENKCSPRSNCQDD 558
             |:::.||....::|:.:..|:|||.|..|.....|..||..||||||||..|.:|:.:.||...
Zfish   494 -NKNLLFDTGLDHLYITTGRKISKVPVQVCGQKNDCRSCLVQRDPYCGWCVREGRCTRKKNCHKG 557

  Fly   559 ANDPLY-W 565
            ..:.:: |
Zfish   558 EGENVWLW 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexANP_524637.2 Sema_plexin_like 75..520 CDD:200497 144/478 (30%)
PSI 522..574 CDD:396154 17/45 (38%)
TIG_plexin 580..670 CDD:465588
PSI 671..>702 CDD:396154
TIG_2 738..829 CDD:465619
PSI 830..883 CDD:396154
IPT_plexin_repeat1 885..977 CDD:238585
IPT_plexin_repeat2 978..1063 CDD:238584
IPT 1078..1177 CDD:472823
TIG <1196..>1246 CDD:460355
Plexin_cytopl 1353..1911 CDD:462434
plxnb2a.3XP_005164765.1 Sema 58..520 CDD:472829 145/481 (30%)
PSI 522..565 CDD:396154 16/42 (38%)
Blue background indicates that the domain is not in the aligned region.

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