DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PlexA and plxnd1

DIOPT Version :9

Sequence 1:NP_524637.2 Gene:PlexA / 43832 FlyBaseID:FBgn0025741 Length:1945 Species:Drosophila melanogaster
Sequence 2:NP_991260.2 Gene:plxnd1 / 402998 ZFINID:ZDB-GENE-040426-1828 Length:1880 Species:Danio rerio


Alignment Length:2019 Identity:664/2019 - (32%)
Similarity:1015/2019 - (50%) Gaps:339/2019 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 AFDT--KLNHLLVDTITGRVFVGGVNRLYQLSPDLELSETVKTGPQNDSVECSILDCPL-NAVRS 131
            ||.|  :.|:..:|..:|||::..||.||||:..|.|...::|||        :||.|| :|.:.
Zfish    36 AFATPGRTNNFALDAASGRVYLAAVNNLYQLNATLALEVEMRTGP--------VLDNPLCHAPQL 92

  Fly   132 P----------TDNYNKVLLIDRATSRLIACGSLFQGTCTVRNLQNVSIIEHEVPD--------- 177
            |          |||:||:|.:|||...|:||||::||.|.:|.|:|||.:..:.|.         
Zfish    93 PQATCEHQKTLTDNHNKLLALDRAQDVLLACGSVYQGFCELRRLENVSRLAVQFPQDGATVFPSM 157

  Fly   178 -AVVANDANSSTVAFI---APGPPQHPVTNVMYVGVTYT---------NNS--PYRSE-IPAVAS 226
             .:.||..|:|||..:   ..|.|:      :.||.|||         |:|  ..|.| .|.:|.
Zfish   158 LNIAANHENASTVGLVFRTHGGSPR------LLVGATYTGMGTEYFPKNHSKEDLRFENTPEIAI 216

  Fly   227 RSLEKTKMFQIASSAVTTGTRTF--INSYARETYFVNYVYGFSSERFSYF-----LTTQLKHSHH 284
            |:|:..::.::.:..:.......  |....::...:::|:.|:...:||.     ..:.||.|..
Zfish   217 RALDTRELGRLFTYDINPSEDNVFKIKQEVKQKNKLSFVHAFALGNYSYIAFNNDANSGLKESQP 281

  Fly   285 SSPKEYITKLVRICQE--------DSNYY--SYTEIPVECISDAQGGTKFNLVQAGFLGKPSSDL 339
            :|      .|.|||.:        :|...  ||.::.:.|      ||...|:..    .|:...
Zfish   282 NS------VLARICLDTDAPRRAAESRKLTESYAQMGLRC------GTYTRLLSV----SPAELR 330

  Fly   340 AQSLGISIQDDVLFAVFSKGEGNTPTNNSALCIYSLKSIRRKFMQNIKSCFNG--SGMRGLDFI- 401
            |::.        |||||.:.:|     .:|:|::.:..:.....|..::|.:|  |.::.||.: 
Zfish   331 AETF--------LFAVFGRADG-----RAAVCVFRVAEVEEMIRQGRRNCSHGPNSDVQVLDSVI 382

  Fly   402 -SPSMPC-----VLTKLQTIGEDFCG-LDVNSPLGGETPITSVPVAMFNTK-LTSVAATSTSGYT 458
             .....|     ::.:||| .:..|| ..:..||....|:.:.|  ::..: |:|||..|...:|
Zfish   383 QGSGAECEGKGSIMLQLQT-DQLNCGAAHLQHPLALRRPLRARP--LYEAQGLSSVAVDSAHNHT 444

  Fly   459 VVFVGTSDGFLKKVVIESSSIANEYASFAVDLGSEINRDMQFD-NQNLYIYVMSKTKVSKVKVFD 522
            ::|:| |.|.|.||.:.|:...::..|..:.....::..|.|| :...|:|||:...:.:|:|..
Zfish   445 LMFLG-SRGRLHKVSLHSNFSVSQQWSLRLPANEPVHHIMTFDPSDRTYLYVMTSHHLLRVRVSS 508

  Fly   523 CSDYKTCGDCLGARDPYCGWCSLENKCSPRSNCQDDANDPLYWVSYKTG--KCTTITSVVPHQLQ 585
            |..|.:|||||.|.||:||||:||.:||.:.:| ...:....|:|...|  :|.::| :.|.::.
Zfish   509 CEQYSSCGDCLSAGDPHCGWCTLERRCSVQQDC-SSVSLSRSWISISEGVQQCPSMT-ITPAEIS 571

  Fly   586 RTT-ARTLELII-DHLPQLKE-NLICAFTTEDKALFTNATKKRN-GVN----CTTPRTDMLPQIE 642
            |:. .|.:.::: ..:|.|:. .:.|.:   ...:.||||...: |.:    |..|....||.|.
Zfish   572 RSAEMRDVGILVAGSVPDLQGLRVECDY---GMGISTNATVHLDYGTSHIQTCPLPPAHTLPTIP 633

  Fly   643 QGKHHFTAKLSVRTRNGPDLVSTDFTFFDC----STHS--SCTRCVSSEFPCDWCVEAHRCTHDT 701
            .|..|.|..:|:.. ||..:||..|..:||    ..||  :||.|:||.:.|.|..:.|:|.  :
Zfish   634 SGTDHVTVPVSINA-NGVSVVSGRFIIYDCERTGQIHSTTACTSCLSSAWRCFWDPQLHQCV--S 695

  Fly   702 AENCRNDILVTGVSRIGPSYRSGPGFCPTINATGDGSEV--LVAGGT---SKSIKVKVHIIGQFI 761
            ::|....:|....|            ||::.|    .||  |..|.:   |..:|...|      
Zfish   696 SKNNTQQLLQNSSS------------CPSMVA----YEVPPLPTGSSPVFSLELKNVEH------ 738

  Fly   762 VQTRFVCQFNIEGRVTSLNAQLL-GDTIYCDSMEFQYT--SRSPNLTATFAVIWGGSKPLDNPHN 823
             .|...|.:: :|:  ...||.| |..:.|.....:.|  |.|.:|....|   |.:..:|||..
Zfish   739 -GTALECVYS-DGQ--QYRAQWLDGPWVNCSGATLKTTQWSESFSLNLRRA---GDATYIDNPQR 796

  Fly   824 IHVVIYRCREMADSCGICL---ALSEKYNCGWCSSTNTCEVEEQCNKNKEGKTDWLNRSEICPNP 885
            :.|.:|.|......|..||   ||.::  |.||.  :.|..::||......:         ||.|
Zfish   797 MTVEVYSCSAGVSDCSQCLGRAALGQE--CVWCE--HICRQQDQCPTTSSAR---------CPAP 848

  Fly   886 EIHTFQPKTGPWEGGTNITIRGINLGKNYNDIYSGVRIAGINCMPFPQFYIDTKQIVCTVDSPGE 950
            .||..:|.:||..|||.:|:.|.|||...:.:  .|.|.|:.|...||.|..:.::||..|:..|
Zfish   849 LIHKIEPLSGPLTGGTLLTVTGKNLGHRADQL--SVSIGGVTCHTLPQQYTVSIRLVCETDASLE 911

  Fly   951 QMYRNGKIVVQI-GDYRGESKEDYEFVDPKILDFNPKFGPTSGGTEIHITGKHLNAGSRIQASIN 1014
            ||  :|::.|.: ||..|.|||.:.||:|::|.|:|..||.:|||.:.|.|:.|:|||.....||
Zfish   912 QM--SGQVTVGVAGDAVGVSKEQFSFVEPRLLRFSPAQGPLAGGTTLTIQGQFLDAGSTTDIQIN 974

  Fly  1015 DHLPCKILSTDSSQAICRTSASPGIIEGRLKMSFDNGP--REFNDYNFKYVLDPTVEHVSSGPSG 1077
            :...|.|.:..|....|...|:.......:.:.||..|  ....::.|.|..:||:.|:  .|| 
Zfish   975 NTHTCSIRTRSSEIIRCVMPAAASAENVSVCVVFDGRPCVSASPNFTFSYQKNPTISHI--WPS- 1036

  Fly  1078 QIKVPKGIPAGGIRISVTGTQFTSIQNPNIYVVYNGEMYASPCRVQSDTEMECASPVVDVDSHVI 1142
                 :...:||..|||:|..|..:|:..:.|...|:   :.|...|.|.:.|.||..|      
Zfish  1037 -----RSYISGGRSISVSGVGFDLVQSVVMEVPGVGQ---TNCSCVSSTLILCQSPAAD------ 1087

  Fly  1143 EAERPILLEYGFLMDNV-------LRVQNLSKVHNNH--FELYPNPEYFIF--EERVKYFKSE-- 1194
            :|::..:|   |.::.|       ..::...:.|...  |:...:|:::..  |:.:|:...|  
Zfish  1088 QAQQTAVL---FSLNGVQYRDAASAGLEEGEQPHTQRYSFQYVEDPQFYTANKEKLIKHHPGEPL 1149

  Fly  1195 YLTINGRNLDRACKESDVEVKIGNGFCNITSLSRQQLTCRPPSEATATKSMNGPEVIVRIGTSLE 1259
            .|.||....|......:..|.||:..|:||..::|...|......:|  |.....|.||:|    
Zfish  1150 ILIINKGPSDLDLTLDEYSVTIGSDLCDITFHNQQLFHCSINRSLSA--STGELPVTVRVG---- 1208

  Fly  1260 YRIGILSYESSNIILDWGENVIFAVIATIV---ILLLIFVALLVAYKKKSSESSRVLRNMQEQMD 1321
                  .::....::..|.....|::.:||   :|||:....||.|..||..:.|..:....||:
Zfish  1209 ------HFQKVIAMVQMGGGSELAIVVSIVVCCVLLLLCTVALVVYCTKSRRAERYWQKTLVQME 1267

  Fly  1322 ILELRVAAECKEAFAELQTEMTDLTGDLT-SGGIPFLDYRSYAMKILFP---------------- 1369
            .:|.::..|.::.||||||:|||||.:|: :.|||||:|:.:..:..||                
Zfish  1268 EMESQIRDEIRKGFAELQTDMTDLTKELSRTQGIPFLEYKQFVTRTFFPKMCCDYERRLVQPVYE 1332

  Fly  1370 --------NHEDHIVLQ-WE-----RPELLRKEKGLRIFGQLIMNKTFLLLFIRTLESNRYFSMR 1420
                    :.|.|.:|| |:     ||.|   |:|:.:|..|:.||.||:.|:..||..|.|::|
Zfish  1333 NDPLGPRAHSETHPLLQDWQPAGSVRPNL---EEGITLFSTLLNNKHFLVTFVHALEQQRDFAVR 1394

  Fly  1421 ERVNVASLIMVTLQSKLEYCTDILKTLLGDLIEKCIEGKSHPKLLLRRTESVAEKMLSAWFTFLL 1485
            :|.|:|||:.:.|..||||.|.|:|.||.|||:  .....:|||:|||||||.||||:.|.:..:
Zfish  1395 DRCNLASLLTIALHGKLEYYTSIMKDLLVDLID--ASATKNPKLMLRRTESVVEKMLTNWMSICM 1457

  Fly  1486 YKFLKECAGEPLYMLFRAVKGQVDKGPVDACTHEARYSLSEEKLIRQSIDFRPMNVYASIIQQPI 1550
            |.:|||..|||.::|..|:|.|::||.:|..|.:|||:|:||.|:|::|:.:|.||..|.     
Zfish  1458 YSYLKETVGEPFFLLLCAIKQQINKGSIDVLTGKARYTLNEEWLLRENIEAKPQNVMVSF----- 1517

  Fly  1551 FCNNLDMLPSHTENVSVKVLDCDTIGQVKEKCLETIYRNIPSSQRPRKDDLDLEWRTGATGRVIL 1615
              ..|.|     ::|.|:|::.|||.|||||.||..|:|:|.||.||::|::|||........||
Zfish  1518 --QGLGM-----DSVCVRVMNSDTICQVKEKILEAFYKNLPYSQWPREEDVELEWFPEGRSSRIL 1575

  Fly  1616 YDEDVTSKTESEWKKLNTLQHYNVPDGAGLSLVPKQSSIYNFSILSDKNEKS-HKYETLNISKYT 1679
            .|.|.:|..|...|||||:.||.:||||.|::           .|.||.|.: .:.:.|:..||.
Zfish  1576 QDLDDSSVMEDGRKKLNTVFHYQIPDGASLAM-----------SLKDKRENTLGRVKDLDTEKYV 1629

  Fly  1680 SSSPTFSRAGSPLNNDMHENGLRYWHLVKHHDSDMQ-----KEGERVNKLVSEIYLTRLLATKGT 1739
                                     |||..||..|:     ::.:| .|::.||||||||:||||
Zfish  1630 -------------------------HLVLPHDELMESRKTHRQSQR-KKVLPEIYLTRLLSTKGT 1668

  Fly  1740 LQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDDQAQLHGITDPEVVHTWKSNSLPLRFWVNLI 1804
            ||||:||||:.|.|......  ||||||.||||::||...|||||:.:|.||:||||||||||::
Zfish  1669 LQKFLDDLFQAILSVPAENP--PLAIKYFFDFLEEQADKRGITDPDTLHIWKTNSLPLRFWVNIL 1731

  Fly  1805 KNPNFVFDIHKSNIVDSCLSVVAQTFMDSCSTSDHRLGKDSPSSKLLYAKDIPEYRKWVDRYYRD 1869
            |||.|||||.|::.:|:||||:||.|:|:||.||.:||||||::||||||:||||:|.|..:||.
Zfish  1732 KNPQFVFDIEKTDHMDACLSVIAQAFIDACSLSDLQLGKDSPTNKLLYAKEIPEYKKRVQSFYRQ 1796

  Fly  1870 IRDMSPISDQDMNAMLAEESRLHTTEFNTNCALHELYTYAVKYNEQLTVTLEEDEFSQKQRLAFK 1934
            |:::..:|:|:||..||||||.|..||||..||.|:|.||.:|..|:...|:.:..:::.:|..|
Zfish  1797 IQELPALSEQEMNTHLAEESRKHRNEFNTTLALTEVYKYAKRYRAQVASALDSNPTARRTQLQHK 1861

  Fly  1935 LEQV 1938
            .|||
Zfish  1862 FEQV 1865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexANP_524637.2 Sema_plexin_like 75..520 CDD:200497 135/509 (27%)
PSI 522..574 CDD:279745 22/53 (42%)
PSI 671..>699 CDD:279745 13/33 (39%)
PSI 830..883 CDD:279745 12/55 (22%)
IPT_plexin_repeat1 885..977 CDD:238585 36/92 (39%)
IPT_plexin_repeat2 978..1063 CDD:238584 26/86 (30%)
IPT 1078..1177 CDD:301692 23/107 (21%)
IPT_PCSR 1196..>1255 CDD:238337 17/58 (29%)
Plexin_cytopl 1353..1916 CDD:285529 267/598 (45%)
plxnd1NP_991260.2 Sema_plexin_D1 33..507 CDD:200508 138/517 (27%)
PSI 508..561 CDD:279745 22/53 (42%)
PSI 672..711 CDD:279745 12/52 (23%)
IPT 848..937 CDD:301692 36/92 (39%)
IPT 938..1024 CDD:301692 26/85 (31%)
IPT 1028..1108 CDD:301692 26/99 (26%)
Plexin_cytopl 1300..1843 CDD:285529 267/598 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D56043at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100269
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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