DRSC/TRiP Functional Genomics Resources

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Protein Alignment PlexA and LOC108179158

DIOPT Version :10

Sequence 1:NP_524637.2 Gene:PlexA / 43832 FlyBaseID:FBgn0025741 Length:1945 Species:Drosophila melanogaster
Sequence 2:NP_001429833.1 Gene:LOC108179158 / 108179158 -ID:- Length:826 Species:Danio rerio


Alignment Length:1118 Identity:232/1118 - (20%)
Similarity:376/1118 - (33%) Gaps:376/1118 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 NVAAFDTKLNHLLVDTITGRVFVGGVNRLYQLSPDLELSETVKTGPQNDSVECSILDCPLNAVRS 131
            :|..||..:...:|.  .|::||...|||||:..|  |||..|....|:|..      |:|.:..
Zfish    19 DVVDFDGDIKDFVVG--NGKLFVLTENRLYQMRHD--LSEEKKKNDINNSTH------PVNILVP 73

  Fly   132 PTDNYNKVLLIDRATSRLIACGSLFQGTCTVRNLQNVSIIEHEVPDAVVANDANSSTVAFIAPGP 196
            ..||           ..||.||:...|.|.|.::.::....:...:..:.......:|||||.  
Zfish    74 FDDN-----------GTLITCGTYEDGYCEVLDINDIKNSIYYESNLFIGPKETEKSVAFIAG-- 125

  Fly   197 PQHPVTNVMYVGVTYTNNSPY----------RSEIPAVASRSLEKTKMFQIASSAVTTGTRTFIN 251
                           |::|.|          .|:.|.|...:..:|:...|.|.| ..|:...|.
Zfish   126 ---------------TSSSRYLLIGKKLDQSTSQSPVVRLWNTLQTQFGGILSYA-EQGSEPAIQ 174

  Fly   252 SYARETYFVNYVYGFSSERFSYFLTTQ---------LKHSHHSSPKEYITKLVRICQEDSNYYSY 307
            |.|.:..||:.....||.....||.|:         |..:...|.|..|.|            |.
Zfish   175 STANDVKFVDGFQRASSSDLYLFLNTKTDSERKVHVLWMNSSKSTKSEIFK------------SL 227

  Fly   308 TEIPVECISDAQGGTKFNLVQAGFLGKPSSDLAQSLGISIQDDVLFA-VFSKGEGNTPTNNSALC 371
            ....::|.||                |....|..|..|..:..|::| |||..:...| .|:||.
Zfish   228 QSAVIKCCSD----------------KARPVLVSSAVIPSEKAVIWAGVFSAQDQQDP-ENTALA 275

  Fly   372 IYSLKSIRRKFMQNIKSCFNGSGMRGLDFISPSMPCVLTKLQTIGEDFCGLDVNSPLGGETPITS 436
            :|::..|:.:                           :.:....||..||.:..|.|   .|:: 
Zfish   276 LYNISRIQGR---------------------------VKEFCAAGERMCGSESGSNL---QPLS- 309

  Fly   437 VPVAMFNTKLTSVAATSTSGYTVVFVGTSDGFLKKVVIESSSIANEYAS------FAVDLGSEIN 495
              |.:.::.::||||.....:.|:|:|||||.|.|:|::.:     |..      :..|....:.
Zfish   310 --VIIKSSSMSSVAAVRNGSWIVLFMGTSDGQLIKLVLDEN-----YTPGCPTVLYKSDDERAVL 367

  Fly   496 RDMQFDNQNL-YIYVMSKTKVSKVKVFDCSDYKTCGDCLGARDPYCGWCSLENKCSPRSNCQDDA 559
            ..:.||..:. :||:....|:.:|.|..|:.|.|..||..|.||.||||....:||.:..|.:.:
Zfish   368 PRLHFDPVDFKHIYIALGKKIRRVSVVHCAKYNTLMDCRSALDPLCGWCVNTLRCSTQDKCSNSS 432

  Fly   560 NDPLYWVSYKTGKCTTITSVVPHQLQRTTARTLELIIDHLPQLKENLICAFTTEDKALFTNATKK 624
                 |||            :|                     |.:|                  
Zfish   433 -----WVS------------IP---------------------KNSL------------------ 441

  Fly   625 RNGVNCTTPRTDMLP-QIEQ-GKHHFTAKLSVRTRNGPDLVSTDFTFFDC-STHSSCTRCVSSE- 685
                     :|::|. |:.| ....||..|::      .|.||....|.| .:|.:...|..|: 
Zfish   442 ---------QTELLSFQVAQKSSTEFTLHLAL------SLESTGNPAFSCVFSHGNVNLCDESDL 491

  Fly   686 ---FPCDWCVEAHRCTHDTAENCR-NDILVTGVSRIGPSYRSGPGFCPTINATGDGSEVLVAGGT 746
               ||        :|      :|| :|.||                                  .
Zfish   492 TAVFP--------KC------SCRFSDQLV----------------------------------N 508

  Fly   747 SKSIKVKVHIIGQFIVQTRFVCQFNIEGRVTSLNAQLLGDTIYCDSMEFQYTSRSPNLTATFAVI 811
            ::.:||...:..:             :.::|.:  .:|.:   |.|:    |..|||::.|    
Zfish   509 TEDLKVSATVTVE-------------DQKITKM--LILSN---CSSI----TDNSPNVSYT---- 547

  Fly   812 WGGSKPLDNPHNIHVVIYRCREMADSCGICLALSEKYNCGWCSSTNTCEVEEQCNKNKEGKTDWL 876
                                     .|..|::    ..|.|.||:..|....:....       |
Zfish   548 -------------------------QCVQCIS----SGCHWSSSSQRCYWSHESGLQ-------L 576

  Fly   877 NRSEICPN-------PEIHTFQPKTGPWEGGTNITIRGINLGKNYNDIYSGVRIAG-INCMPFPQ 933
            |..:.|.:       |||.:.:|....:.|..|:.::|.||     |..:.:||.| ::|:....
Zfish   577 NIQDACKDVLSGYKEPEILSLEPYKVSFHGKNNVLLKGRNL-----DSVTKIRIRGDLDCVAKES 636

  Fly   934 FYIDTKQIVCTVDSPGEQMYRNGKIVVQIGD--YRGESKEDYEFVDPKILDFNPKFGPTSGGTEI 996
            ...|........:.|..:.....|:.|...|  ..|.|...|. ..||.....|:....|||.:|
Zfish   637 PVFDGSSDTLRFNIPPSETKGTVKLCVVTPDNLCHGNSNIIYS-SQPKCTGVQPRSSWRSGGRKI 700

  Fly   997 HITGKHLNAGSRIQASINDHLPCKILSTDSSQAICRTSASPGIIEGRLKMSFDNGPREFNDYNFK 1061
            |:.|.::.....:....::.:.....:|::.:....:....|  .|:|.:|.:.|....:     
Zfish   701 HVQGTNMEYVESVNVCHSNKVVETKYNTNAEEMWIHSPRYDG--SGQLSLSLNVGNSTVD----- 758

  Fly  1062 YVLDPTVEHVSSGPSGQIKVPKGIPAGGIRISVTGTQFTSIQNPNIYVVY----NGEMYASPCRV 1122
                 .|.::|..|.     ||            .|||::.|..:..:||    ..|:..|...|
Zfish   759 -----CVHYISYHPD-----PK------------FTQFSTFQVADDLLVYIQKKTDELNLSMSEV 801

  Fly  1123 -----QSDTEMEC 1130
                 |.|.|.||
Zfish   802 NVTGQQGDREYEC 814

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexANP_524637.2 Sema_plexin_like 75..520 CDD:200497 107/471 (23%)
PSI 522..574 CDD:396154 18/51 (35%)
TIG_plexin 580..670 CDD:465588 13/91 (14%)
PSI 671..>702 CDD:396154 7/35 (20%)
TIG_2 738..829 CDD:465619 11/90 (12%)
PSI 830..883 CDD:396154 9/52 (17%)
IPT_plexin_repeat1 885..977 CDD:238585 22/94 (23%)
IPT_plexin_repeat2 978..1063 CDD:238584 15/84 (18%)
IPT 1078..1177 CDD:472823 16/62 (26%)
TIG <1196..>1246 CDD:460355
Plexin_cytopl 1353..1911 CDD:462434
LOC108179158NP_001429833.1 None
Blue background indicates that the domain is not in the aligned region.

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