DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PlexA and plxnb1

DIOPT Version :10

Sequence 1:NP_524637.2 Gene:PlexA / 43832 FlyBaseID:FBgn0025741 Length:1945 Species:Drosophila melanogaster
Sequence 2:XP_012817153.2 Gene:plxnb1 / 100498269 XenbaseID:XB-GENE-856606 Length:2221 Species:Xenopus tropicalis


Alignment Length:2289 Identity:710/2289 - (31%)
Similarity:1042/2289 - (45%) Gaps:510/2289 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 LNSTITNVAAF--DTKLNHLLVDTITGRVFVGGVNRLYQLSPDLELSETVKTGPQNDSVEC---S 120
            ::.||..||..  :|..|||.:|..||.::||..|.||||:.:|.:...|:|||..||.||   .
 Frog    21 VSGTIPYVAFVQNNTIFNHLTLDANTGTLYVGATNSLYQLTENLAVEMLVRTGPVWDSKECLPPV 85

  Fly   121 ILDCPLNAVRSPTDNYNKVLLIDRATSRLIACGSLFQGTCTVRNLQNVSII----EHEV-PDAVV 180
            ..|||   ....|:|:||:||:..:...||.|||::||.|..|.|.:|..:    |..| ...|.
 Frog    86 STDCP---QAQNTNNHNKLLLVVPSKRELIVCGSVYQGICESRRLGSVQTVLFRPERPVDTQYVA 147

  Fly   181 ANDANSSTVAFIAPGPPQHPVTNVMYVGVTYTNNSPYRSEIPAVASRSLEKTKMFQIASSAV--- 242
            |||.|.:||..:|......|   :::||..||:..  ...||.:.:|:||.....::.|.:|   
 Frog   148 ANDPNVTTVGLVALSKDGSP---LLFVGRGYTSKG--AGGIPPITTRNLEVGGDSEMESHSVFSY 207

  Fly   243 -TTGTRTFINSYARETYFVNYVYGFSSERFSYFL--TTQLKHSHHSSPKEYITKLVRICQEDSNY 304
             .|.....:...:.  |..:::..|:.:...|||  ...||    |..:||.|.:.|||..||:|
 Frog   208 EDTAKLAVVGRLSE--YNHHFIKAFTHKSNVYFLFYRRDLK----SQSREYKTYISRICPNDSHY 266

  Fly   305 YSYTEIPVECISDAQGGTKFNLVQAGFLGKPSSDLAQSLGISIQDDVLFAVFSKGEGNTPT--NN 367
            |||.|:|:.|.:..:   .:||:||.::.:|...||:.: :....|||||.||:.:..:..  ..
 Frog   267 YSYVELPLSCRTKDK---SYNLLQAAYVTQPGERLAKGV-LKTDGDVLFAAFSQWQAASGKVGEE 327

  Fly   368 SALCIYSLKSIRRKFMQNIKSCFNGSGM----RGLDFISPSMP--CVLTKLQTIGEDFCGLD-VN 425
            |.||:||:..|.|...|...:|:...|.    |.:.:|...:.  ||.....|:....||.| ..
 Frog   328 SGLCLYSMDLIDRLINQTRDTCYTKDGKAEDGREVAYIEYDVKSNCVQLPSDTLDAYPCGSDHTP 392

  Fly   426 SPLGGETPITSVPV-AMFNTKLTSVAATSTSGYTVVFVGTSDGFLKKVVIESSSIANEYASFAVD 489
            ||:..:.|:.:.|: ....|:.|::|......:|:.|:|.|.|:|.||.:.......:|:|....
 Frog   393 SPMASKDPLEATPLFESATTRFTAIAVHVEGEHTIAFIGDSKGYLNKVYLGGEQDTRQYSSVGTQ 457

  Fly   490 LGSEINRDMQFDNQNLYIYVMSKTKVSKVKVFDCSDYKTCGDCLGARDPYCGWCSLENKCSPRSN 554
            ..|.:..|:.||.:..::|:::::.|.||.:.:||.:..|..||.|.|||||||.|..|||....
 Frog   458 SNSAVLPDLLFDQEEKHLYILTQSTVMKVPLSECSTFTDCDSCLSAGDPYCGWCVLYGKCSRSYE 522

  Fly   555 C-QDDANDPLYWVSYKTGKCTTITSVVPHQLQRTTARTLELIIDHLPQL--KENLICAFTTEDKA 616
            | :....:...|...:..:|..:.|:.|..:.:...|.:.|.|..||.|  :|:..|.|  ||  
 Frog   523 CLRSGQKNQWLWAYDQNQQCLAVQSLSPANISKEEKRNIFLSIPDLPALEHEESYSCFF--ED-- 583

  Fly   617 LFTNATKKRNGVNCTTPRTDMLPQIEQGKHHFTAKLSVRTRNGPDLVSTDFTFFDCST------H 675
            ..:.|..:..||.|.:|.....|.|:.|..|...||.:|. ....:.||:|||:||..      :
 Frog   584 FESRAVIRDTGVMCPSPDPSKTPAIKPGTDHVQVKLVLRF-GEVTICSTEFTFYDCMAVAQLYKN 647

  Fly   676 SSCTRCVSSEFPCDWCVEAHRCTHDTA---------------------------ENCRNDILVTG 713
            :.|..||||::.|:||::.|.|||...                           |.....:|.|.
 Frog   648 APCRGCVSSDWGCNWCIQQHHCTHKATCEEGTIIYNKLTQIPFLDPTIPPEVPFELTTTVVLSTV 712

  Fly   714 VSRIGPSY--------------------------------------------------------- 721
            ||...||.                                                         
 Frog   713 VSETSPSEAPVTTASPTPSTTTFTTIPETSPTTFPPTTIPTTLPVTTPATTPTTVLQPDPSTAIL 777

  Fly   722 --------------------RSGPGFCPT------------------------------------ 730
                                .|.|...||                                    
 Frog   778 DLATEDTIPDITMEPSTEEPTSRPTTIPTTMFVDIATSPPVTDNEYEEFTEESVLPELVTTEGST 842

  Fly   731 ------------------------------------INATG------------------------ 735
                                                :.:||                        
 Frog   843 TFYMTTTPVPVPPPTTPETQEEHPWVPTILHPTQEELTSTGQPITTPNQASSVSSLPGSPDEFHS 907

  Fly   736 --------------DGSE---------------------------VLVAG-----GTSKS----- 749
                          ||:|                           .:::|     |.|.|     
 Frog   908 EIPFSEEPPTVPSEDGTEENLDQTEADDWADSASMDNDTSSFSASTILSGDGESDGVSPSFPGIL 972

  Fly   750 -------------------------------------------IKVKVHIIGQFI-----VQTRF 766
                                                       ::.|:.::|:..     .|..:
 Frog   973 EPDLDYQFDSPGLFEMDEEELIWGPEACPCVESIQSASLLPVNVERKITLVGKNFHHYQDQQMDY 1037

  Fly   767 VCQFNIEGRVTSLNAQLLGDT-------IYCDSMEFQYTSRSPNLTATFAVIWGGSKPLDNPHNI 824
            .|...:|||....:|.|..|.       |.|...::.|::......|...|.......:|:..::
 Frog  1038 DCVLLLEGRTVVTDAVLELDPEEESKYYITCQLHQYSYSALQLEFNAMVFVRIQSYLRVDSAEDL 1102

  Fly   825 HVVIYRCREMADSCGICLALSEKYNCGWCSSTN-TCEVEEQCNKNKEGKTDWLNRSEICPNPEIH 888
            :|.:|.|......|..|.....||||.||..:: .|..:|.|.:..||         .||.|.||
 Frog  1103 YVTLYNCSVGHPDCSRCQTADPKYNCVWCGGSHPNCMYQETCKEKVEG---------TCPAPLIH 1158

  Fly   889 TFQPKTGPWEGGTNITIRGINLGKNYNDIYSGVRIAGINCMPFPQFYIDTKQIVCTVDSPGEQMY 953
            :.:|.:||.||||.|||.|.|||:...||...|.:|||.|......|..:.:|||.:.|...:  
 Frog  1159 SIEPLSGPMEGGTRITITGSNLGQKLEDIVDTVTVAGIQCQVDLLRYEISSRIVCVIASSLTE-- 1221

  Fly   954 RNGKIVVQI-GDYRGESKEDYEFVDPKILDFNPKFGPTSGGTEIHITGKHLNAG--SRIQASIND 1015
            |.|.:.|:: |...|.|.:.:.:.:|.:..|:|..||.||||.:.:||..|..|  |.|...|.|
 Frog  1222 RLGHVAVEVPGGGHGISSQVFSYQNPVLHSFSPTRGPKSGGTRLTLTGTKLLTGRPSDITVLIGD 1286

  Fly  1016 HLPCKILSTDSSQAI-CRTSASPGIIEGRLKMSFDNGPREFNDYN--FKYVLDPTVEHVSSGPSG 1077
             :||.|.|......: |.|.:|....:  |:::...|.:....|.  |.|..||.:  .|:.|: 
 Frog  1287 -IPCHIYSEMQENMLECLTGSSNSTAD--LQVTIKYGDQVLRTYESPFTYTADPNI--TSASPA- 1345

  Fly  1078 QIKVPKGIPAGGIRISVTGTQFTSIQNPNIYVVYNG----------------------------- 1113
                 |...:||..|.|:|.....:|.|.|.|..:.                             
 Frog  1346 -----KSFISGGRMIFVSGQNLDVVQAPKIRVTVSPRERRRKRSLSRHRRIVPETECPENALCTV 1405

  Fly  1114 EMYASPCRVQSDTEMECASPV---------VDVDSHVIEAERPILLEYGFLMDNVLRVQNLSKVH 1169
            |.:...|.:.|...:.|.:|.         |||:               |::||:  ..|...::
 Frog  1406 EKFEELCLINSSFLLLCKTPAINRLHWNSRVDVE---------------FILDNL--HFNFGAIN 1453

  Fly  1170 NNHFELYPNP--EYFIFEERVKYFK---SEYLTINGRNLDRACKESDVEVKIGNGFCNITSLSRQ 1229
            :..|...|:|  :....|:.||.::   ...:::.|.|||.|..:.::...||:|.|.:.:|:|.
 Frog  1454 SVPFTYEPDPVLKQLNPEDPVKPYRHKPGSVISVEGENLDLAITKDEMVAMIGDGVCMVKTLTRN 1518

  Fly  1230 QLTCRPPSEATATKSMNG-------PEVIVRIGTSLEYRIGILSYESSNIILDWGENVIFAVIAT 1287
            .|.|.||.:..|.:....       ||..|:|| .:...:|.:.|::.:.:....|..|...:.|
 Frog  1519 HLYCEPPEKQPAPRQPQKREGVDSLPEFTVQIG-RMYLVLGKVQYDTESQLTFPLEAQIGLGVGT 1582

  Fly  1288 IVILLLIFVALLVAYKKKSSESSRVLRNMQEQMDILELRVAAECKEAFAELQTEMTDLTGDLTSG 1352
            ..:.|::.:.:|: |::||.::.|..:.:|.|::.||..|...||:.|.:|.|||.|||.||...
 Frog  1583 SFVALIVLIIVLI-YRRKSKQALRDYKKVQIQLENLETSVRDRCKKEFTDLMTEMMDLTSDLVGT 1646

  Fly  1353 GIPFLDYRSYAMKILFPNH-EDHIVLQWERPELLRK--EKGLRIFGQLIMNKTFLLLFIRTLESN 1414
            |||||||:|||.:|.||.| |..:....:.||..|:  |:||.....|:.:|.||..||.||||.
 Frog  1647 GIPFLDYKSYAERIFFPGHRESPLQRDLDVPEGRRQTVEQGLVQLSNLLNSKLFLTKFIHTLESQ 1711

  Fly  1415 RYFSMRERVNVASLIMVTLQSKLEYCTDILKTLLGDLIEKCIEGKSHPKLLLRRTESVAEKMLSA 1479
            |.||.|:|..||||:.|:|..||||.||||||||.||:|:.:  ..:|||:|||||:|.||:|:.
 Frog  1712 RTFSARDRAYVASLLTVSLHGKLEYFTDILKTLLNDLVEQYV--AKNPKLMLRRTETVVEKLLTN 1774

  Fly  1480 WFTFLLYKFLKECAGEPLYMLFRAVKGQVDKGPVDACTHEARYSLSEEKLIRQSIDFRPMNVYAS 1544
            |.:..||.|:::.||||||||||.:|.||||||||..|.:|:|:|::.:|:|..::::.:.:.| 
 Frog  1775 WMSICLYTFVRDSAGEPLYMLFRGIKHQVDKGPVDCVTGKAKYTLNDNRLLRDDVEYKTLTLNA- 1838

  Fly  1545 IIQ--QPIFCNNLDMLPSHTENVSVKVLDCDTIGQVKEKCLETIYRNIPSSQRPRKDDLDLEWRT 1607
            |:|  ..|.|.      ...:.:.||:||||||.|||||.|:.||:..|...||..:.||||||:
 Frog  1839 IMQTNTGITCE------EEAQGLPVKLLDCDTITQVKEKILDQIYKGTPYCNRPNPEALDLEWRS 1897

  Fly  1608 GATGRVILYDEDVTSKTESEWKKLNTLQHYNVPDGAGLSLVPKQSSIYNFSILSDKNEKSHKYET 1672
            |..|.:||.|||:||.....||::||||||.|||||.::|||:.|        ...:.::|.|  
 Frog  1898 GLAGHLILSDEDLTSVVHGSWKRVNTLQHYKVPDGATVALVPRLS--------KHIHPENHDY-- 1952

  Fly  1673 LNISKYTSSSPTFSRAGSPLNNDMHENGLRYWHLVK--------HHDSDMQKEGERVNKLVSEIY 1729
                        .....:|:..|..|.|:|.|||||        .|.....::.||. |.:.|||
 Frog  1953 ------------IPGEKTPMLEDSDEGGVRVWHLVKPTDEPELPKHRRGSLRDRERA-KAIPEIY 2004

  Fly  1730 LTRLLATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDDQAQLHGITDPEVVHTWKSNS 1794
            |||||:.||||||||||||:.|.||:.   .:|||:||.||.||:||..|||.|||.:|.||:||
 Frog  2005 LTRLLSMKGTLQKFVDDLFQVILSTSR---PVPLAVKYFFDLLDEQAISHGINDPETIHIWKTNS 2066

  Fly  1795 LPLRFWVNLIKNPNFVFDIHKSNIVDSCLSVVAQTFMDSCSTSDHRLGKDSPSSKLLYAKDIPEY 1859
            ||||||:|:||||.||.|:..|:.||:.|||:||||||||:.:||:||:|||.:|||||:|||.|
 Frog  2067 LPLRFWINIIKNPQFVCDVQTSDNVDAVLSVIAQTFMDSCTIADHKLGRDSPINKLLYARDIPRY 2131

  Fly  1860 RKWVDRYYRDIRDMSPISDQDMNAMLAEESRLHTTEFNTNCALHELYTYAVKYNEQLTVTLEEDE 1924
            ::.|:|||.|||.....|||:||:.|||.||..:.|.|:..||||||.|..||.:|:...||||.
 Frog  2132 KQMVERYYSDIRQTISASDQEMNSALAELSRNCSGELNSLVALHELYKYINKYYDQIIEALEEDP 2196

  Fly  1925 FSQKQRLAFKLEQV 1938
            .:||.:|.::|:|:
 Frog  2197 TAQKMQLGYRLQQI 2210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexANP_524637.2 Sema_plexin_like 75..520 CDD:200497 145/468 (31%)
PSI 522..574 CDD:396154 19/52 (37%)
TIG_plexin 580..670 CDD:465588 28/91 (31%)
PSI 671..>702 CDD:396154 14/36 (39%)
TIG_2 738..829 CDD:465619 22/182 (12%)
PSI 830..883 CDD:396154 14/53 (26%)
IPT_plexin_repeat1 885..977 CDD:238585 35/92 (38%)
IPT_plexin_repeat2 978..1063 CDD:238584 28/89 (31%)
IPT 1078..1177 CDD:472823 23/136 (17%)
TIG <1196..>1246 CDD:460355 16/49 (33%)
Plexin_cytopl 1353..1911 CDD:462434 285/570 (50%)
plxnb1XP_012817153.2 Sema_plexin_B1 30..489 CDD:200536 146/476 (31%)
PSI 491..542 CDD:396154 19/50 (38%)
TIG_plexin 550..636 CDD:465588 28/90 (31%)
PSI 650..>677 CDD:214655 12/26 (46%)
TIG_2 1011..1107 CDD:465619 17/95 (18%)
PSI 1108..1153 CDD:214655 14/53 (26%)
IPT_plexin_repeat1 1155..1246 CDD:238585 35/92 (38%)
IPT 1247..1334 CDD:472823 28/89 (31%)
IPT 1337..1461 CDD:472823 26/148 (18%)
Plexin_cytopl 1647..2183 CDD:462434 285/570 (50%)

Return to query results.
Submit another query.