DRSC/TRiP Functional Genomics Resources

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Protein Alignment PlexA and LOC100496572

DIOPT Version :9

Sequence 1:NP_524637.2 Gene:PlexA / 43832 FlyBaseID:FBgn0025741 Length:1945 Species:Drosophila melanogaster
Sequence 2:XP_002935671.2 Gene:LOC100496572 / 100496572 -ID:- Length:1368 Species:Xenopus tropicalis


Alignment Length:1543 Identity:317/1543 - (20%)
Similarity:522/1543 - (33%) Gaps:539/1543 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VLSVLLIAILKDKYDYWLPSRTGCQTLAANIWSDKTTAQNEPINLTNANAPIKNAKNLNSTITNV 68
            :||:||:..:         :.:.|.:|..::..|.......| |.| |:.||:|..:...::   
 Frog     8 LLSLLLLPTI---------TTSQCPSLPPSLTLDTKVRYQFP-NFT-ASRPIQNLVSFEDSL--- 58

  Fly    69 AAFDTKLNHLLVDTITGRVFVGGVNRLYQLSPDLELSETVKTGPQNDSVECSILD-CPLNAV--R 130
              |.|..|||.|  :.|.              :|.|.:.:.||| .|| :|::.. |.|...  :
 Frog    59 --FLTTTNHLYV--LKGN--------------ELHLLQNITTGP-TDS-QCTLCSKCQLGEALPK 103

  Fly   131 SPTDNYNKVLLIDRATSRLIACGSLFQGTCTVRNLQNVSIIEHEVPDAVVANDANSSTVAFIAP- 194
            .|.|..::||.:|...|.:.:|||...|.|.:..:.:..|:|.|.......|.|:|......:| 
 Frog   104 QPEDTVSQVLAVDPEESVIYSCGSSLHGLCYMHIIASSKIVESECLFRQSGNSASSCPDCIASPL 168

  Fly   195 GPPQHPVTNVMYVGVTYTNNSPYRSEIPAVASRSLEKTKMFQIASSAVTTG--TRTFINSYARET 257
            |.....||...  ||.:...|...|.|....|.:....:....:....:.|  :.:.:.|| |::
 Frog   169 GTLLSVVTQSR--GVYFYTASSLDSRIAESYSPTSISIRRLLGSQDGFSPGFHSLSVLESY-RDS 230

  Fly   258 YFVNYVYGFSSERFSYFLTTQLKHSHHSSPKEYITKLVRICQEDSNYYSYTEIPVECISDAQGGT 322
            |.::||:.|.|..:.||||.|.:|...::   |.:::||:.:.:....||.|:.:||..:.:...
 Frog   231 YPIHYVHTFVSGSYVYFLTVQPEHPLSNT---YHSRVVRLSKNEEEMRSYRELILECRLEPKRRR 292

  Fly   323 K--------FNLVQAGFLGKPSSDLAQSLGISIQDDVLFAVFSKGEGNT--PTNNSALCIYSLKS 377
            :        ||:::|..:....|.||..|.||.:|.||||||::.|..:  |..|||:|.:.|:.
 Frog   293 RRRRAEPKIFNVLKAAHVATVGSTLAGELDISEKDPVLFAVFAQSEPKSAQPRYNSAVCAFPLRL 357

  Fly   378 IRRKFMQNIKSCFNGSG----MRGLDFISPSMPCVLTKLQTIGEDFCGLDVNSPLGGETPITSVP 438
            |.......:.:|.:.:.    .|||:|..|.|.|.....|:                :|...:||
 Frog   358 IDLSIEDGMNACCSNTNSVRLTRGLNFFQPEMDCPQKDNQS----------------DTSCKNVP 406

  Fly   439 ---------VAMFNTK-----LTSVAATSTSGYTVVFVGTSDGFLKKVVIESSSIANEYASFAVD 489
                     |.:||.:     ||||..:.....|:.|:|||.|.|.:||::.:|.....::|::.
 Frog   407 TLVLPPLRRVDIFNGQLDGVLLTSVYVSPQEDLTIGFLGTSAGRLLQVVLQRNSNPRTLSNFSIS 471

  Fly   490 LGSEINRDMQFDNQNLYIYVMSKTKVSKVKVF--DCSDYKTCGDCLGA-RDPYCGWCSLENKCSP 551
            ....::|::.....:|:.  ::..:|:||.:.  .|..:.||..||.| |...|.||  :|.|..
 Frog   472 DNYPVSREVTQIGDSLFF--VTGNQVTKVNITGPGCRHFLTCSRCLRAPRFMGCSWC--KNVCCQ 532

  Fly   552 RSNCQDDANDPLYWVSYKTGKCTTITSVVPHQLQRTTARTLELIIDHLPQLKENLICAFTTEDKA 616
            :..|:              |:|...|                                       
 Frog   533 QGECE--------------GECAQNT--------------------------------------- 544

  Fly   617 LFTNATKKRNGVNCTTPRTDMLPQIEQGKHHFTAKLSVRTRNGPDLVSTDFTFFDCSTHSSCTRC 681
                         |....||..|:        ||.|  |......|...||       .||    
 Frog   545 -------------CLPAITDFYPK--------TAPL--RGNTNITLCGRDF-------QSS---- 575

  Fly   682 VSSEFPCDWCVEAHRCTHDTAENCRNDILVTGVSRIGPSYRSGPGFCPTINATGDGSEVLVAGGT 746
                           ..::.....:   :..|..|:.    .||..|            :|..|.
 Frog   576 ---------------VVYNAPPKAK---ITAGTHRVS----VGPRTC------------IVNPGK 606

  Fly   747 SKSIKVKVHIIGQFIVQTRFVCQFNIEGRVTSLNAQLLGDTIYCDSMEFQYTSRSPNLTATFAVI 811
            |.|              |..||....||         |.||                        
 Frog   607 SNS--------------TSLVCTLQTEG---------LPDT------------------------ 624

  Fly   812 WGGSKPLDNPHNIHVVIYRCREMADSCGICLALSEKYNCGWCSSTNTCEVEEQCNKNKEGKTDWL 876
                                   |.:..|.|.:.|...                           
 Frog   625 -----------------------ASTADIALTIDENLT--------------------------- 639

  Fly   877 NRSEICPNPEIHTFQPKTGPWEGGTNITIRGINLGKNYNDIYSGVRIAGINCMPFPQFYIDTKQI 941
                                   ||...|:|                                  
 Frog   640 -----------------------GTPYYIKG---------------------------------- 647

  Fly   942 VCTVDSPGEQMYRNGKIVVQIGDYRGESKEDYEFVDPKILDFNPKFGPTSGGTEIHITGKHLNAG 1006
              |:.:.|                       :.||:|.|....|.|||.:|||.:.:.|::|.:|
 Frog   648 --TISAAG-----------------------FNFVEPAITSIEPNFGPLAGGTMLTLKGQNLRSG 687

  Fly  1007 -------SRIQASINDHL-PCKILSTDSSQAICRTSASPGIIEGRLKMSFDNGPREFNDYNFKYV 1063
                   |..:..|:..| |.::|...|.:::   |..|..:...|..:..:.|.:     |:|.
 Frog   688 ETQRVFISGAECMISGSLCPAEVLCCVSPRSL---SLGPLNVSALLDGAEISSPAQ-----FQYK 744

  Fly  1064 LDPTVEHVSSGPSGQIKVPKGIPAGGIRISVTGTQFTSIQNPNIYVVYNGE-MYASPCR-VQSDT 1126
            .||.|..:.         |....|.|.|:::.|:...|:.  :|.:.|:|: ..:|.|: ..|..
 Frog   745 PDPLVSVIR---------PNCSLASGTRLTIQGSNLDSVS--SIKISYSGQKTVSSDCQGTFSSD 798

  Fly  1127 EMECASPVVDVDSHVIEAERPILLEYGFLMDNVLRVQNLSKVHNNHFELYPNPEYFIFEER---- 1187
            .:.|.||           |.|.....|.|   .|.:..::.::...|....|  |.|...|    
 Frog   799 RIVCRSP-----------EYPYFGRPGNL---TLALDAVNYIYPYRFRYLQN--YVIHPFRPKDP 847

  Fly  1188 ----VKYFKSE-YLTINGRNLDRACKESDVEVKIGNGFCNITSLSRQQLTCR-P-----PSEATA 1241
                :|..|.| .:..:..||::......|.:.:|...||.|.| :.::||| |     |||.:.
 Frog   848 DGGILKLKKGEDEIETHQENLEQVATCLKVSMTVGGRECNPTVL-KNEITCRIPKGMVIPSEGSI 911

  Fly  1242 TKSMNGPEV----IVRIGTSLEYRIGILSYESSNIILDWGENVIFAVIATIVILLLIFVALLVAY 1302
            .:.....:.    :|.|...|:..:||               |:.:|.:.:|:.:|||:.|....
 Frog   912 VQVCVDDDCTTVGLVMIVNMLDPVLGI---------------VLGSVASVLVVAVLIFLLLKHQR 961

  Fly  1303 KKKSS---ESSRVLRNMQEQMDI-------LELRVAAECKEAFAELQTEMTDLTGDLTSGGIPFL 1357
            |||..   |:..:|.|...:..:       ::.|.:.........:.:.....:|....||    
 Frog   962 KKKKKPAVEALELLSNNNREPVLSPISLLHVDYRTSYIPSSNSGGMLSHGAGYSGGSLGGG---- 1022

  Fly  1358 DYRSYAMKILFPNHEDHIVLQWERPELLRKEKGL------------RIFGQ----LIMNKTFL-- 1404
                 :|.||..:..|.:     |||||.:.|.:            ||.|:    .:.:.|::  
 Frog  1023 -----SMPILLTSLLDSL-----RPELLEEVKDVLIPERCLTTHRDRIIGKGHFGSVYHGTYVDE 1077

  Fly  1405 -----------LLFIRTLESNRYFSMRERV--------NVASLIMVTL 1433
                       |..|..||....| :||.:        ||.|||.:.|
 Frog  1078 DQQEVHCAVKSLNRITDLEEVEEF-LREGILMKSFHHPNVLSLIGIFL 1124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexANP_524637.2 Sema_plexin_like 75..520 CDD:200497 124/478 (26%)
PSI 522..574 CDD:279745 14/52 (27%)
PSI 671..>699 CDD:279745 2/27 (7%)
PSI 830..883 CDD:279745 4/52 (8%)
IPT_plexin_repeat1 885..977 CDD:238585 7/91 (8%)
IPT_plexin_repeat2 978..1063 CDD:238584 23/92 (25%)
IPT 1078..1177 CDD:301692 21/100 (21%)
IPT_PCSR 1196..>1255 CDD:238337 16/68 (24%)
Plexin_cytopl 1353..1916 CDD:285529 28/118 (24%)
LOC100496572XP_002935671.2 Sema 21..501 CDD:417757 136/528 (26%)
PSI 504..>544 CDD:396154 15/55 (27%)
IPT 547..658 CDD:417750 40/344 (12%)
IPT_plexin_repeat2 659..745 CDD:238584 24/93 (26%)
IPT 747..835 CDD:238050 23/112 (21%)
PTKc_Met_Ron 1059..1320 CDD:270649 17/67 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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