DRSC/TRiP Functional Genomics Resources

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Protein Alignment PlexA and plxnc1

DIOPT Version :10

Sequence 1:NP_524637.2 Gene:PlexA / 43832 FlyBaseID:FBgn0025741 Length:1945 Species:Drosophila melanogaster
Sequence 2:XP_031754770.1 Gene:plxnc1 / 100492725 XenbaseID:XB-GENE-856588 Length:1523 Species:Xenopus tropicalis


Alignment Length:2006 Identity:508/2006 - (25%)
Similarity:784/2006 - (39%) Gaps:653/2006 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 TITNVAAFDTKLNHLLVDTI------TGRVFVGGVNRLYQLSPDLELSETV-KTGPQNDSVECSI 121
            :|.:|.:.|.:   |||..:      :..|.|...:.||..  |..||:.: :|.....|.||. 
 Frog    18 SIDSVLSEDPR---LLVSAVRNIAVGSDYVVVATESCLYLF--DHTLSQRLAETSANESSTECR- 76

  Fly   122 LDCPLNAVRSPTDNYNKVLLIDRATSRLIACGSLFQGTCTVRNLQNVSIIEHEVPDAVVANDANS 186
            ...|..|.......||.:||:.|  ..:::|.......|..|.|.....|....||.:..|    
 Frog    77 GSAPGQATMGQKPPYNMLLLVYR--DIVLSCWITNTSFCNERKLNKFENISSITPDLLTPN---- 135

  Fly   187 STVAFIAPGPPQHPVTNVMYVGVTYTNNSPY---------RSEIPAVASRSLEKTKMFQIASSAV 242
                           |::...|:.::|...|         .|::..|:.::.|            
 Frog   136 ---------------TSLSAAGIVFSNEQTYLILATFTNKHSDLHPVSIKTRE------------ 173

  Fly   243 TTGTRTFI----NSYA--RETYFVNYVYGFSSER---FSYFLTTQLKHSHHSSPKEYITKLVRIC 298
               |..||    ||||  ..|..:.:|..||.||   |.||:           |:....|::.:.
 Frog   174 ---TMGFITENENSYAELNTTTVLQFVNAFSWERIFFFPYFV-----------PELDNAKILSVK 224

  Fly   299 Q---EDSNYYSYTEIPVECISDAQGG---TKFNLVQAG---FLGKPSSDLAQSLGISIQDDVLFA 354
            .   .|...:....:|  |.||.:.|   :.|:.:::|   :.|                  :|.
 Frog   225 NPKGADLQLWGLAHLP--CGSDIRRGVILSSFHFMKSGGHFWAG------------------IFT 269

  Fly   355 VFSKGEGNTPTNNSALCIYSLKSIRRKFMQNIKSCFNGSGMRGLDFISPSMPCVLTKLQTIGEDF 419
              |:.:..:| :.:|||||:|.::    |:..|.|                         |.|||
 Frog   270 --SQSQAMSP-DKTALCIYNLTNM----MKQEKEC-------------------------IAEDF 302

  Fly   420 ---CGLDVNSPLGGETPITSVPVAMFNT-------KLTSVAATSTSGYTVVFVGTSDGFLKKVVI 474
               |....:|..      .|:|:...|.       .|::|.|.......|.|:||.:|.:.||.:
 Frog   303 RDECSSKDHSAK------NSLPILPINLGPTLTHGNLSAVFAVEVQNKMVFFLGTGNGQVLKVTL 361

  Fly   475 ESSSIAN-EYASFAVDLGSEINRDMQFDNQN-LYIYVMSKTKVSKVKVFDCSDYKTCGDCLGARD 537
            :|...|| ....|..|..:.::|.::.|..| .||||.::.|:.::||.:|..:||..:||.|:|
 Frog   362 DSEWKANCPEILFQFDNDTAVSRTIKADPVNSTYIYVAAENKIKRIKVANCESFKTYKECLSAKD 426

  Fly   538 PYCGWCSLENKCSPRSNCQDDANDPLYW--VSYKTGKCTTITSVVP---HQLQRTTARTLELIID 597
            ||||||..:.:|:..:.| ..::.|..|  :|.:.|...... |||   .|| |.||::..    
 Frog   427 PYCGWCHSQTRCTLNAEC-IPSDVPGNWNGMSEEGGNYLDFL-VVPIKDKQL-RITAKSSN---- 484

  Fly   598 HLPQLKENLICAFTTE----DKALFTNATKKRNGVNC-----TTPRTDMLPQIEQGKHHFTAKLS 653
                 .:|.....|.:    :|.| .|...::|.:.|     ||..:|            ..:|.
 Frog   485 -----AKNTTWQCTVQNVGTNKTL-CNGVAEKNSMKCSCLVSTTGLSD------------NDQLG 531

  Fly   654 VRTRNGPDLVSTDFTFFDC-STHSSCTRCVSSEFPCDWCVEAHRCTHDTAENCRNDILVTGVSRI 717
            :...||...||..|.|..| ...:.|..|:.|  .|.||                          
 Frog   532 IELTNGKRSVSDVFQFKKCRQLQNRCMECIQS--GCLWC-------------------------- 568

  Fly   718 GPSYRSGPGFCPTINATGDGSEVLVAGGTSKSIKVKVHIIGQFIVQTRFVCQFNIEGRVTSLNAQ 782
                        |.|||                                                
 Frog   569 ------------TTNAT------------------------------------------------ 573

  Fly   783 LLGDTIYCDSMEFQYTSRSPNLTATFAVIWGGSKPLDNPHNIHVVIYRCREMADSCGICLALSEK 847
                   |.|                        || .|                   |....||
 Frog   574 -------CTS------------------------PL-TP-------------------CKDYGEK 587

  Fly   848 YNCGWCSSTNTCEVEEQCNKNKEGKTDWLNRSEICPNPEIHTFQ----PKTGPWEGGTNITIRGI 908
            .||                            :.:.|.|   |:|    |:....:...||:|:.|
 Frog   588 ANC----------------------------TALPPKP---TYQVMALPENSMLDNKDNISIKSI 621

  Fly   909 N-------------LGKNYNDIYSGVRIAGINCMPFPQFYIDTKQIVCTVDSPGEQMYRNGKIVV 960
            :             .|:|..::||.:.....:|   |...::..|||           .:...|:
 Frog   622 SSDRISYLGKDILITGENLQNLYSVLLFGTSSC---PAQNVEISQIV-----------NDTHAVL 672

  Fly   961 QIGDYRGESK--------------EDYEFVD-PKILDFNPKFGPTSGGTEIHITGKHLNAGSRIQ 1010
            .:...|.|.|              :...:|. |...:.:|......||..|.||||:::..:.:.
 Frog   673 SLPKSRKEVKSICFNPKENGCSENKTINYVSLPSCFNISPNTAWHGGGRNITITGKNMDIVNSLI 737

  Fly  1011 ASINDHLPCKILSTDSSQAICRTSASPGIIEGRLKMSFDNGPREFNDYNFKYVLDPTVEHVSSGP 1075
            .|...|....|:....:.:.|:..| |...          .|.::.:.|.. |:|.|.       
 Frog   738 VSNTLHQWRPIILCPGNISQCKFLA-PQFA----------APTQWLNINMS-VVDNTF------- 783

  Fly  1076 SGQIKVPKGIPAGGIRISVTGTQFTSIQNP--NIYVVYNGEMYASPCRVQSDTEMECASPVVDVD 1138
                     |..|.::.         ::||  ..:.|.|          ..|||:|......:.:
 Frog   784 ---------IACGSLKY---------LENPCFTSFAVLN----------DIDTELELRIKKTNDN 820

  Fly  1139 SHVIEAERPILLEYGFLMDNVLRVQNLSKVHNNHFELYPNPEYFIFEERVKYFKSEYLTINGRNL 1203
            ..:...|..|.:.|            |:|::                :.:.|           |:
 Frog   821 LGIQRQEMQIHIYY------------LNKIY----------------DCIVY-----------NI 846

  Fly  1204 DRACKESDVEVKIGNGFCNITSLSRQQLTCRPPSEATATKSMNGPEVIVRIG---TSLEY----R 1261
            .:..|||.|       ||.....||.::            .::..:|.|.:|   |.||.    |
 Frog   847 TQNLKESTV-------FCKAKKDSRDKI------------DVSIMKVNVTLGNFTTILETPGFPR 892

  Fly  1262 IGILSYESSNIILDWGENVIFAVIATIVILLLIFVALLVAYKKKSSESSRVLRNMQEQMDILELR 1326
            :.||                  ::..::.|||:.:|..:..|:||.|.|   ..:.||::.||..
 Frog   893 LYIL------------------LVLLLIPLLLVIIAACLVTKRKSKEMS---NKLSEQLEQLECD 936

  Fly  1327 VAAECKEAFAELQTEMTDLTGDLTSGGIPFLDYRSYAMKILFPNHE----DHIVLQWE------R 1381
            |..|.:..|||||.:..|:|.: :.|.||||||:.:|::...|..|    |.....:|      |
 Frog   937 VIEEIRSGFAELQMDKLDMTVE-SLGTIPFLDYKHFALRTFLPEMEESKNDFTEKMYENVPSPFR 1000

  Fly  1382 PELLRKEKGLRIFGQLIMNKTFLLLFIRTLESNRYFSMRERVNVASLIMVTLQSKLEYCTDILKT 1446
            ...:.:.:.|.:..:|...|.||:..|.|||....||:|:|...||.:.::.||.|.|.|::|:.
 Frog  1001 NRTVDENEHLHLLRKLFEKKRFLVHLIHTLEHQSNFSVRDRCRFASFLTISFQSNLVYLTELLEV 1065

  Fly  1447 LLGDLIEKCIEGKSHPKLLLRRTESVAEKMLSAWFTFLLYKFLKECAGEPLYMLFRAVKGQVDKG 1511
            |:.||:::  .....|||:|||||||.||:|:.|.:..||.:|:|..|||||:|...:..::.||
 Frog  1066 LIKDLMDQ--SSNKQPKLMLRRTESVVEKLLTNWMSTCLYGYLREFVGEPLYLLVCMLNQRIHKG 1128

  Fly  1512 PVDACTHEARYSLSEEKLIRQ------SIDFRPMNVYASIIQQPIFCNNLDMLPSHTENVSVKVL 1570
            |:||.|.:|.|:|:|:.|:.|      |:|   :|||        |.|..:  .:.||::.|.||
 Frog  1129 PIDAITCKALYTLNEDSLLWQINAKFSSLD---LNVY--------FPNGSE--ENVTESIKVTVL 1180

  Fly  1571 DCDTIGQVKEKCLETIYRNIPSSQRPRKDDLDLEWRTGATGRVI--------LYDEDVTSKT-ES 1626
            ||||:||.|||.::..:         .|...:..:....||.|:        |.|.|.||.. |:
 Frog  1181 DCDTVGQAKEKIVQKFF---------IKKGYNWGFPLHDTGLVLHHGQLQKQLSDIDNTSVVLEN 1236

  Fly  1627 EWKKLNTLQHYNVPDGAGLSLVPKQSSIYNFSILSDKNEKSHKYETLNISKYTSSSPTFSRAGSP 1691
            ...|||||:||.:.||..:.::                          |.|              
 Frog  1237 GIIKLNTLKHYKIEDGVTVKVI--------------------------IQK-------------- 1261

  Fly  1692 LNNDMH--ENGLRYWHLV-KHHDSDMQKEGERVNK-----LVSEIYLTRLLATKGTLQKFVDDLF 1748
             |.|:.  ||..:|:||| .......|.|||. |:     .|.|:|||:||:||..:...|:.||
 Frog  1262 -NCDVQDLENSSKYYHLVLPSSQGSEQIEGEE-NQGKHKFQVKELYLTKLLSTKVAIHSSVEKLF 1324

  Fly  1749 ETIFSTAHRGSALPLAIKYMFDFLDDQAQLHGITDPEVVHTWKSNSLPLRFWVNLIKNPNFVFDI 1813
            .:|::..  .:..|.|:||.||.||.||::..|||.:|:|.||:||||||||||::|||.||||:
 Frog  1325 RSIWTIP--TNKPPTAVKYFFDLLDSQAEIKKITDLDVLHIWKTNSLPLRFWVNILKNPQFVFDL 1387

  Fly  1814 HKSNIVDSCLSVVAQTFMDSCSTSDHRLGKDSPSSKLLYAKDIPEYRKWVDRYYRDIRDMSPISD 1878
            .|:::::|||||:||.||||.|.|:..|||.||::|||||||||.:::.|..||:.|||..|:|.
 Frog  1388 KKTHLLESCLSVIAQAFMDSFSISEQHLGKSSPTNKLLYAKDIPMFKEEVKNYYKGIRDAPPVSS 1452

  Fly  1879 QDMNAMLAEESRLHTTEFNTNCALHELYTYAVKYNEQLTVTLEED---EFSQKQRL 1931
            .::|..|..||:.|..||..:.||.|||.|..:|::.:...||::   |..|||.|
 Frog  1453 AELNEFLMAESKKHENEFKEDVALLELYKYIKRYHQVVLDMLEKEPGFEDEQKQLL 1508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexANP_524637.2 Sema_plexin_like 75..520 CDD:200497 107/490 (22%)
PSI 522..574 CDD:396154 19/53 (36%)
TIG_plexin 580..670 CDD:465588 23/101 (23%)
PSI 671..>702 CDD:396154 7/31 (23%)
TIG_2 738..829 CDD:465619 5/90 (6%)
PSI 830..883 CDD:396154 5/52 (10%)
IPT_plexin_repeat1 885..977 CDD:238585 21/122 (17%)
IPT_plexin_repeat2 978..1063 CDD:238584 17/84 (20%)
IPT 1078..1177 CDD:472823 15/100 (15%)
TIG <1196..>1246 CDD:460355 9/49 (18%)
Plexin_cytopl 1353..1911 CDD:462434 223/590 (38%)
plxnc1XP_031754770.1 Sema 32..410 CDD:472829 105/485 (22%)
PSI 411..458 CDD:396154 17/47 (36%)
IPT 704..>739 CDD:214657 9/34 (26%)
Plexin_cytopl 962..1485 CDD:462434 223/590 (38%)

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