DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PlexA and plxnb3

DIOPT Version :9

Sequence 1:NP_524637.2 Gene:PlexA / 43832 FlyBaseID:FBgn0025741 Length:1945 Species:Drosophila melanogaster
Sequence 2:XP_002935540.2 Gene:plxnb3 / 100490083 XenbaseID:XB-GENE-856492 Length:1925 Species:Xenopus tropicalis


Alignment Length:2005 Identity:668/2005 - (33%)
Similarity:1037/2005 - (51%) Gaps:282/2005 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 ITNVAAF---DTKLNHLLVDTITGRVFVGGVNRLYQLSPDLELSETVKTGPQNDSVEC----SIL 122
            :::|.:|   :...||:..|..:|.:::|.||.::|||.||:|.....|||:.||.||    .:.
 Frog    75 VSSVPSFLRPNVTFNHMARDPTSGFIYIGAVNWIFQLSSDLQLLLEDSTGPREDSPECLPFKDLK 139

  Fly   123 DCPLNAVRSPTDNYNKVLLIDRATSRLIACGSLFQGTCTVRNLQNVSIIEHEVPDA-----VVAN 182
            ||....:   |.|.||:|.::.....||.||.:|||.|..|.|.|:|.|..:..|.     |.||
 Frog   140 DCRQATL---TPNTNKLLAVNTHGGELITCGQVFQGICEKRRLSNISDIIFQTIDPGDNQFVAAN 201

  Fly   183 DANSSTVAFIAPGPPQHPVTNVMYVGVTYTNNSPYRSEIPAVASRSLEKTKMF------QIASSA 241
            |...:||. |..||.::  ..:::||...|  :...|.||.:..|.||||.:|      ::....
 Frog   202 DPKVTTVG-IVEGPSEN--HQLLFVGRGLT--ARLSSGIPPITIRQLEKTPVFSNEGLGKLVVGD 261

  Fly   242 VTTGTRTFINSYAR--ETYFVNYVYGFSSERFSYFLTTQLKHSHHSSPKEYITKLVRICQEDSNY 304
            .:....||:..::.  ..||:.:..|..|:                  .:|.|.|..:|..|.:.
 Frog   262 FSDYNNTFVGIFSNNGHVYFLFFRRGSKSQ------------------MDYNTYLGSVCTGDVHL 308

  Fly   305 YSYTEIPVECISDAQGGTKFNLVQAGFLGKPSSDLAQSLGISIQDDVLFAVFSKGEGNT--PTNN 367
            |||.|:|:.|    |||  :||.||.:|...:.:             ||.||:..:|.|  |::.
 Frog   309 YSYVEVPLVC----QGG--YNLAQAAYLETGNRE-------------LFVVFAASQGPTPNPSSR 354

  Fly   368 SALCIYSLKSIRRKFMQNIKSCFNGSGMRGLDFISPSMPC-VLTKLQTIGEDF-----CGLD-VN 425
            :|||.|.:..|..:.....:.|:..:|| |.|.....:.. |.:|...:.:|.     ||.: ..
 Frog   355 TALCSYKMVDIESRIENAREMCYTNAGM-GNDKEEAVIEYGVNSKCGKLSKDTPQLFQCGGEHTP 418

  Fly   426 SPLGGETPITSVPVAMFNTKLTSVAATSTSGYTVVFVGTSDGFLKKVVIESSSIANEYASFAVDL 490
            ||:....|:.:.|:....:.||:|||.:...||:.|:|.:.|.:.||.: ||.....|::....|
 Frog   419 SPIASRVPVEATPLLKDLSSLTAVAALAEDTYTIAFLGDAAGNIHKVFV-SSDTGAVYSTVTSLL 482

  Fly   491 GSEINRDMQFDNQNLYIYVMSKTKVSKVKVFDCSDYKTCGDCLGARDPYCGWCSLENKCSPRSNC 555
            ||.:|.|:..|.....:|:|:::||:|:.|.:||.:.:|..||.||||:||||.|:.:|..:..|
 Frog   483 GSPVNPDLILDGVAKQLYIMTESKVTKMPVAECSTFSSCDSCLAARDPFCGWCVLQGRCMAKQQC 547

  Fly   556 QDDANDPLYWVSY-KTGKCTTITSVVPHQLQRTTARTLELIIDHLPQLKENLICAFTTEDKALFT 619
            .|...:..|..|| |...|..|..:.|....||..|.:.|.:..||.::|.      :..|.||.
 Frog   548 VDYTEENHYLWSYDKEATCLAIEDITPANQSRTQQRLVTLTVPGLPSVEEQ------SSWKCLFD 606

  Fly   620 NATKKR----NGVNCTTPRTDMLPQIEQGKHHFTAKLSVRTRNGPDLVSTDFTFFDCS------T 674
            :.:.:.    :.|.|.||..::||..:.||.|...:|::...| ..:...:|:|:||.      .
 Frog   607 DISNEAIVHGSHVTCWTPLPNVLPPNQPGKDHVVMRLALLFEN-ITIAEMNFSFYDCEAVMKLVV 670

  Fly   675 HSSCTRCVSSEFPCDWCVEAHRCTHDTAENCRNDILVTGVSRIGPSYRSGPGFCPTINATGDGSE 739
            ::.|..||:|::.|.|||..:||.||| :||..|.::....|:|     ||..||.|.:. |||.
 Frog   671 NAPCAGCVNSQWECHWCVNDYRCIHDT-QNCSQDQVIIFNQRLG-----GPDACPRIESV-DGST 728

  Fly   740 VLVAGGTSKSIKVKVHIIGQFIVQTR-----FVCQFNIEGRVTSLNAQLLGDT-------IYCDS 792
            ::..|     ::.::.:||:.:...:     :.|..:..|..|:|.||:...|       ::|.:
 Frog   729 LIPVG-----VERELDLIGRNLQLLKEEVLGYSCVIDAHGTTTTLPAQIENVTGEKDVFQVHCQT 788

  Fly   793 MEFQYTSRSPNLTATFAVIWGGSKPLDNPHNIHVVIYRCREMADSCGICLALSEKYNCGWCSST- 856
            .:|:|:.|:.....|..|:.|....:|:..:|.||:|.|......|..|.||..:|||.||:.. 
 Frog   789 HKFEYSLRTLEHQVTIYVMTGDGHRVDDKEDIQVVLYNCSVGQSDCSRCQALHNQYNCVWCTKME 853

  Fly   857 -NTCEVEEQCNKNKEGKTDWLNRSEICPNPEIHTFQPKTGPWEGGTNITIRGINLGKNYNDIYSG 920
             ..|..|.:|..         :..:.||.|.|::|.|.||..:|||.|||.|.|:|:...|:  .
 Frog   854 GEACLHESECQH---------SAMDTCPTPTIYSFSPMTGIIQGGTTITITGANMGQKAEDV--S 907

  Fly   921 VRIAGINCMPFPQFYIDTKQIVCTVDSPGEQMYRNGKIVVQIGDYR-GESKEDYEFVDPKILDFN 984
            |::|...|...|..||.:.:||||:.:...:  .:|.:.|.:...: |.|.|.:.:.||.:...:
 Frog   908 VKVASHPCTLLPDLYIISNRIVCTLSASNAE--ESGPVEVYVDALQPGVSVEHFTYQDPVLQSLH 970

  Fly   985 PKFGPTSGGTEIHITGKHLNAGSRIQASINDHLPCKILS--TDSSQAICRTSASPGIIEGRLKMS 1047
            |..||.:|||.|.|||..|..|..|..::.| :||||.:  ....:..|.|.||..:.|..:.:.
 Frog   971 PLQGPIAGGTLITITGSKLLTGDLINITVGD-IPCKIPNGGVAEGEIHCVTGASSVLEELPVSVF 1034

  Fly  1048 FDNGPREFNDYNFKYVLDPTVEHVSSGPSGQIKVPKGIPAGGIRISVTGTQFTSIQNPNIYVV-- 1110
            :.:..|...|..:.|..:||:..|.  ||      :....||..|.|.||....::.|.:.|:  
 Frog  1035 YGSAKRILEDTKYSYTENPTISLVY--PS------RCFYGGGRVIWVEGTNLDVVKTPVMTVLAK 1091

  Fly  1111 ---------------------------YNG-EMYASPCRVQSDTEMECASPVVDVDSHVIEAERP 1147
                                       :.| :.::.||.:.|.:.::|.||.:   |...|    
 Frog  1092 LSSKELGEDDGSARRKRRKRWGRRALDHEGIKEFSGPCSLNSSSLLKCFSPSI---SETFE---- 1149

  Fly  1148 ILLEYGFLMDNVLRV------QNLSKVHNNHFELY----PNPEYFIFEERVKYFKSEYLTINGRN 1202
             |::..|::|| ||:      :|.:.:.|..|:..    |:..|.:....|       |.|.|..
 Frog  1150 -LVDVLFILDN-LRIPFSSTRENFTYIKNPTFKPLNRESPSKPYNLKPGNV-------LDIEGEG 1205

  Fly  1203 LDRACKESDVEVKIGNGFCNITSLSRQQLTCRPPSEATATKSMNG--PEVIVRIGTSLEYRIGIL 1265
            ||....:.:|...||||.|.:.:|:...|.|.||.|:.....::.  ||.:|.:| :|::.:|.:
 Frog  1206 LDYGISKQEVGATIGNGICIVKTLTHNHLYCEPPPESPQPLDLSTSLPEFVVHMG-NLQFNLGQV 1269

  Fly  1266 SYESSNIILDWGENVI-------FAVIATI---VILLLIFVALLVAYKKKSSESSRVLRNMQEQM 1320
            .|:..      |:...       .||:||:   ::|::|::     |:::|..:.|..:.:..|:
 Frog  1270 KYDVD------GQTAFPKEAKIGLAVVATLLVPIVLIIIYM-----YRRQSKMAMRDYKKVLVQL 1323

  Fly  1321 DILELRVAAECKEAFAELQTEMTDLTGDLTSGGIPFLDYRSYAMKILFP-NHEDHIVLQWERPEL 1384
            :.||.||..:|::.|.:|.|||.||:.:|...|||||||::|..:|.|| |.:..|....:.|..
 Frog  1324 ENLETRVGDQCRKEFTDLMTEMMDLSSELEGSGIPFLDYKTYVERIFFPVNIDSPIPKSLDVPAG 1388

  Fly  1385 LRK--EKGLRIFGQLIMNKTFLLLFIRTLESNRYFSMRERVNVASLIMVTLQSKLEYCTDILKTL 1447
            .|.  |:||.....|:.||.||...|.||::....|.|:|.:.|||:.|.|..||||.||::|||
 Frog  1389 RRSTVEQGLTQLSNLLNNKLFLTKLIETLDAQLTLSQRDRCHAASLLTVALHGKLEYLTDVMKTL 1453

  Fly  1448 LGDLIEKCIEGKSHPKLLLRRTESVAEKMLSAWFTFLLYKFLKECAGEPLYMLFRAVKGQVDKGP 1512
            |.:||::|:  ..:||||.||||::.||:|:.|.:..|...|:|.|.||||||:.|:|.||||||
 Frog  1454 LANLIDQCV--AKNPKLLFRRTETIVEKLLTNWMSICLQTDLREAAAEPLYMLYCAIKYQVDKGP 1516

  Fly  1513 VDACTHEARYSLSEEKLIRQSIDFRPMNVYASIIQQPIFCNNLDMLPSHTENVSVKVLDCDTIGQ 1577
            |||.|.:|:.:|::..|:|:.||:.||.:  ::|.:.         ...|.:|.|:|||.|||.|
 Frog  1517 VDAVTGKAKRTLNDCHLLREDIDYHPMTL--TVIVKS---------GRETHHVPVRVLDTDTITQ 1570

  Fly  1578 VKEKCLETIYRNIPSSQRPRKDDLDLEWRTGATGRVILYDEDVTSKTESEWKKLNTLQHYNVPDG 1642
            ||:|.|..:|:..|.||||....||||||:|..|.:.|.|||:||..:.:||:||||.||.|||.
 Frog  1571 VKQKILNQVYKGTPFSQRPAATTLDLEWRSGNAGHLTLSDEDLTSLIQDQWKRLNTLHHYKVPDN 1635

  Fly  1643 AGLSLVPKQSSIYNFSILSDKNEKSHKYETLNISKYTSSSPTFSRAG---SPLNNDMHENGLRYW 1704
            |.::|:|:   ::|           ::.||          |:.|..|   :|:..|..|.|:|.|
 Frog  1636 ATVALIPR---LHN-----------NQCET----------PSNSFIGGEKTPMLEDGDEGGIRTW 1676

  Fly  1705 HLV---------KHHDSDMQKEGERVNKLVSEIYLTRLLATKGTLQKFVDDLFETIFSTAHRGSA 1760
            |||         |:..|.: :|.||. |.:.||:|||||:.||||||||||.|:.:.....:   
 Frog  1677 HLVKPVEEPEVFKNRKSSL-RERERA-KAIPEIFLTRLLSMKGTLQKFVDDAFQVMLGVNRQ--- 1736

  Fly  1761 LPLAIKYMFDFLDDQAQLHGITDPEVVHTWKSNSLPLRFWVNLIKNPNFVFDIHKSNIVDSCLSV 1825
            :|:||||.|||||:.|:.|.|||.|.||.||:|||.|||||.::|||..|||:..|..|||.|:|
 Frog  1737 VPIAIKYFFDFLDEMAEKHEITDAETVHIWKTNSLMLRFWVLILKNPQMVFDVEVSENVDSILAV 1801

  Fly  1826 VAQTFMDSCSTSDHRLGKDSPSSKLLYAKDIPEYRKWVDRYYRDIRDMSPISDQDMNAMLAEESR 1890
            :||||:|||:.|:|::|:|||.:|||||::||.|::.|:.||.||:..:..|.|:||:.|.|:|.
 Frog  1802 IAQTFIDSCTISEHKVGRDSPVNKLLYAREIPRYKQLVENYYADIKKTAAASYQEMNSFLTEQSG 1866

  Fly  1891 LHTTEFNTNCALHELYTYAVKYNEQLTVTLEEDEFSQKQRLAFKLEQVHNIMSSE 1945
            :|:||.|:..||.|||.|..||.:|::..||||...||.:||::|:|:..::.::
 Frog  1867 VHSTELNSLVALQELYNYINKYYDQISSALEEDPNGQKMQLAYRLQQISALVENK 1921

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexANP_524637.2 Sema_plexin_like 75..520 CDD:200497 139/470 (30%)
PSI 522..574 CDD:279745 21/52 (40%)
PSI 671..>699 CDD:279745 12/33 (36%)
PSI 830..883 CDD:279745 13/54 (24%)
IPT_plexin_repeat1 885..977 CDD:238585 31/92 (34%)
IPT_plexin_repeat2 978..1063 CDD:238584 26/86 (30%)
IPT 1078..1177 CDD:301692 26/138 (19%)
IPT_PCSR 1196..>1255 CDD:238337 20/60 (33%)
Plexin_cytopl 1353..1916 CDD:285529 262/577 (45%)
plxnb3XP_002935540.2 Sema_plexin_B3 81..513 CDD:200538 140/478 (29%)
PSI 515..563 CDD:366642 20/47 (43%)
TIG_plexin 574..660 CDD:375449 23/92 (25%)
PSI 674..>703 CDD:366642 15/29 (52%)
TIG_2 726..825 CDD:375492 23/103 (22%)
IPT 874..963 CDD:387656 31/92 (34%)
IPT 964..1051 CDD:387656 27/87 (31%)
IPT 1053..1173 CDD:387656 29/136 (21%)
Plexin_cytopl 1356..1891 CDD:369821 262/576 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D56043at33208
OrthoFinder 1 1.000 - - FOG0000391
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22625
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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