DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATPsynbeta and ATP4

DIOPT Version :9

Sequence 1:NP_001259081.1 Gene:ATPsynbeta / 43829 FlyBaseID:FBgn0010217 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_015247.1 Gene:ATP4 / 856027 SGDID:S000005999 Length:244 Species:Saccharomyces cerevisiae


Alignment Length:133 Identity:33/133 - (24%)
Similarity:53/133 - (39%) Gaps:22/133 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 IINVI--GEPIDERGPIDTDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPY---------- 179
            |||.|  ...:.:.|.:.|...|.|:|.:.|...::.|..:|:|.:....|:|.|          
Yeast    53 IINAIPGNNILTKTGVLGTSAAAVIYAISNELYVINDESILLLTFLGFTGLVAKYLAPAYKDFAD 117

  Fly   180 AKGGKIGLFGGAGVGKTV-LIMELINNVAKAHGGYSVFAGVGERTREGNDLYNEMI--EGGVISL 241
            |:..|:.....|...|.| .:.:.|::|       |....|.|.|:...|:..|.:  |.....|
Yeast   118 ARMKKVSDVLNASRNKHVEAVKDRIDSV-------SQLQNVAETTKVLFDVSKETVELESEAFEL 175

  Fly   242 KDK 244
            |.|
Yeast   176 KQK 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaNP_001259081.1 PRK09280 44..507 CDD:236447 33/133 (25%)
ATP-synt_ab_N 46..112 CDD:280947
F1-ATPase_beta 114..393 CDD:238553 33/133 (25%)
ATP-synt_ab_C 401..508 CDD:278722
ATP4NP_015247.1 Mt_ATP-synt_B 75..237 CDD:368426 27/111 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3209
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

Return to query results.
Submit another query.