DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATPsynbeta and AT5G46910

DIOPT Version :10

Sequence 1:NP_001259081.1 Gene:ATPsynbeta / 43829 FlyBaseID:FBgn0010217 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_199502.2 Gene:AT5G46910 / 834736 AraportID:AT5G46910 Length:787 Species:Arabidopsis thaliana


Alignment Length:236 Identity:49/236 - (20%)
Similarity:76/236 - (32%) Gaps:78/236 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 ARARVALTGLTVAEYFRDQEGQDVLLFI--------------DNIFRFTQAGSEVSALLGRIPSA 311
            |..|:.|:          :|.:|.|.|:              :.:...|.|.|...||       
plant     2 AERRICLS----------KEAKDGLEFLKRKKLQKMRSDSVNETVGFSTMARSGGDAL------- 49

  Fly   312 VGYQPTLATDMGSMQERIT-----------TTKKGSITSVQAIYVPADDL--TDPAP------AT 357
               :||.|:  ..|:.|:|           :|.:|.:...:...:..|||  |:..|      .|
plant    50 ---RPTSAS--CGMRLRVTSSDTVSKVHGASTVRGGLMKEKVEKLETDDLKWTERLPECPVYRPT 109

  Fly   358 TFAHLDATTVLSRAIAE---LGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKILQDYKS--- 416
            .....|..|.|.:...|   .||...|.||.:|               |..|.  :|...||   
plant   110 KEEFEDPLTYLQKIFPEASKYGICKIVSPLTAT---------------VPAGA--VLMKEKSNFK 157

  Fly   417 LQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVF 457
            ....:..|.:.|...:||:|...:.:...|........:||
plant   158 FTTRVQPLRLAEWDSDDKVTFFMSGRTYTFRDYEKMANKVF 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaNP_001259081.1 AtpD 44..510 CDD:439825 49/236 (21%)
AT5G46910NP_199502.2 JmjN 104..136 CDD:460542 7/31 (23%)
JmjC 280..403 CDD:396791
zf-C5HC2 500..552 CDD:460750
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.