DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbeta and AT5G08680

DIOPT Version :9

Sequence 1:NP_001259081.1 Gene:ATPsynbeta / 43829 FlyBaseID:FBgn0010217 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_680155.1 Gene:AT5G08680 / 830769 AraportID:AT5G08680 Length:559 Species:Arabidopsis thaliana


Alignment Length:513 Identity:375/513 - (73%)
Similarity:425/513 - (82%) Gaps:21/513 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LGQLSTAPFSARSHAAKAAKAAAAAN---------------GKIVAVIGAVVDVQFDD--NLPPI 65
            ||::  |.:|..|.|..||.::|.|.               |::..||||:|||:|:|  .||||
plant    48 LGRV--AEYSTSSPANSAAPSSAPAKDEGKKTYDYGGKGAIGRVCQVIGAIVDVRFEDQEGLPPI 110

  Fly    66 LNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGYPIRIPVGAETLGRIINV 130
            :.:|||.:...||||||:.|||:|.|||||||||||||||:|||:||.||.:|||..|||||:||
plant   111 MTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNV 175

  Fly   131 IGEPIDERGPIDTDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGK 195
            :||||||||.|.|:....||.:||..|.::..||||.||||||||||||.:||||||||||||||
plant   176 LGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGK 240

  Fly   196 TVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYNEMIEGGVISL--KDKTSKVALVYGQMNEP 258
            |||||||||||||||||:|||||||||||||||||.||||.|||.|  |...||.||||||||||
plant   241 TVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEP 305

  Fly   259 PGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 323
            |||||||.||||||||||||.||||||||||||||||||.|||||||||||||||||||||:|:|
plant   306 PGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLASDLG 370

  Fly   324 SMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTS 388
            ::|||||||||||||||||||||||||||||||||||||||||||||.|:|||||||||||||||
plant   371 ALQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTS 435

  Fly   389 RIMDPNIIGQEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQV 453
            |::.|:|:|:||||.||||||:||:||:|||||||||||||||:|||||||||||||||||||.|
plant   436 RMLSPHILGEEHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHV 500

  Fly   454 AEVFTGHAGKLVPLEQTIKGFSAILAGDYDHLPEVAFYMVGPIEEVVEKADRLAKEAA 511
            ||:|||..||.|.|::.|..|..:|.|.||.|.|.:|||||.|:|||.||:::|||:|
plant   501 AEIFTGAPGKYVDLKENINSFQGLLDGKYDDLSEQSFYMVGGIDEVVAKAEKIAKESA 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaNP_001259081.1 PRK09280 44..507 CDD:236447 361/466 (77%)
ATP-synt_ab_N 46..112 CDD:280947 44/67 (66%)
F1-ATPase_beta 114..393 CDD:238553 234/280 (84%)
ATP-synt_ab_C 401..508 CDD:278722 75/106 (71%)
AT5G08680NP_680155.1 Synthase_beta 1..50 CDD:288303 1/1 (100%)
PRK09280 84..554 CDD:236447 361/469 (77%)
ATP-synt_ab_N 89..157 CDD:280947 44/67 (66%)
F1-ATPase_beta 159..440 CDD:238553 234/280 (84%)
ATP-synt_ab_C 448..556 CDD:278722 76/107 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 390 1.000 Domainoid score I146
eggNOG 1 0.900 - - E1_COG0055
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1273
Inparanoid 1 1.050 712 1.000 Inparanoid score I125
OMA 1 1.010 - - QHG62497
OrthoDB 1 1.010 - - D495235at2759
OrthoFinder 1 1.000 - - FOG0001822
OrthoInspector 1 1.000 - - otm3286
orthoMCL 1 0.900 - - OOG6_100608
Panther 1 1.100 - - O PTHR15184
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1349
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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