DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbeta and AT5G08670

DIOPT Version :9

Sequence 1:NP_001259081.1 Gene:ATPsynbeta / 43829 FlyBaseID:FBgn0010217 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_568203.2 Gene:AT5G08670 / 830768 AraportID:AT5G08670 Length:556 Species:Arabidopsis thaliana


Alignment Length:513 Identity:374/513 - (72%)
Similarity:426/513 - (83%) Gaps:21/513 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LGQLSTAPFSARSHAAKAAKAAAAAN---------------GKIVAVIGAVVDVQFDD--NLPPI 65
            ||::  |.::..|.|:.||.::|.|.               |::..||||:|||:|:|  .||||
plant    45 LGRV--AEYATSSPASSAAPSSAPAKDEGKKTYDYGGKGAIGRVCQVIGAIVDVRFEDQEGLPPI 107

  Fly    66 LNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGYPIRIPVGAETLGRIINV 130
            :.:|||.:...||||||:.|||:|.|||||||||||||||:|||:||.||.:|||..|||||:||
plant   108 MTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNV 172

  Fly   131 IGEPIDERGPIDTDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGK 195
            :||||||||.|.|:....||.:||..|.::..||||.||||||||||||.:||||||||||||||
plant   173 LGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQRGGKIGLFGGAGVGK 237

  Fly   196 TVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYNEMIEGGVISL--KDKTSKVALVYGQMNEP 258
            |||||||||||||||||:|||||||||||||||||.||||.|||.|  |...||.||||||||||
plant   238 TVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGEKQSESKCALVYGQMNEP 302

  Fly   259 PGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 323
            |||||||.||||||||||||.||||||||||||||||||.|||||||||||||||||||||:|:|
plant   303 PGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQANSEVSALLGRIPSAVGYQPTLASDLG 367

  Fly   324 SMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTS 388
            ::|||||||||||||||||||||||||||||||||||||||||||||.|:|||||||||||||||
plant   368 ALQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTS 432

  Fly   389 RIMDPNIIGQEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQV 453
            |::.|:|:|:||||.||||||:||:||:|||||||||||||||:|||||||||||||||||||.|
plant   433 RMLSPHILGEEHYNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHV 497

  Fly   454 AEVFTGHAGKLVPLEQTIKGFSAILAGDYDHLPEVAFYMVGPIEEVVEKADRLAKEAA 511
            ||:|||..||.|.|::.|..|..:|.|.||.|.|.:|||||.|:|||.||:::|||:|
plant   498 AEIFTGAPGKYVDLKENINSFQGLLDGKYDDLSEQSFYMVGGIDEVVAKAEKIAKESA 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaNP_001259081.1 PRK09280 44..507 CDD:236447 361/466 (77%)
ATP-synt_ab_N 46..112 CDD:280947 44/67 (66%)
F1-ATPase_beta 114..393 CDD:238553 234/280 (84%)
ATP-synt_ab_C 401..508 CDD:278722 75/106 (71%)
AT5G08670NP_568203.2 Synthase_beta 1..47 CDD:288303 1/1 (100%)
PRK09280 81..551 CDD:236447 361/469 (77%)
ATP-synt_ab_N 86..154 CDD:280947 44/67 (66%)
F1-ATPase_beta 156..437 CDD:238553 234/280 (84%)
ATP-synt_ab_C 445..553 CDD:278722 76/107 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 390 1.000 Domainoid score I146
eggNOG 1 0.900 - - E1_COG0055
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1273
Inparanoid 1 1.050 712 1.000 Inparanoid score I125
OMA 1 1.010 - - QHG62497
OrthoDB 1 1.010 - - D495235at2759
OrthoFinder 1 1.000 - - FOG0001822
OrthoInspector 1 1.000 - - otm3286
orthoMCL 1 0.900 - - OOG6_100608
Panther 1 1.100 - - O PTHR15184
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1349
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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