DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbeta and KDM6A

DIOPT Version :9

Sequence 1:NP_001259081.1 Gene:ATPsynbeta / 43829 FlyBaseID:FBgn0010217 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_011542260.1 Gene:KDM6A / 7403 HGNCID:12637 Length:1489 Species:Homo sapiens


Alignment Length:552 Identity:102/552 - (18%)
Similarity:173/552 - (31%) Gaps:177/552 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GQ-LSTAPFSARSHAAKAAKAAAAANGKIVAVIGAVVDVQFDDNLPPI-LNALEVDNRSPRLVLE 81
            || |:..|||| .|...:......:...|:.....:.....:.|:|.: .|||.:.:....|...
Human   616 GQPLANGPFSA-GHVPCSTSRTLGSTDTILIGNNHITGSGSNGNVPYLQRNALTLPHNRTNLTSS 679

  Fly    82 VAQHLGENTVRTIAMDGTEGLVRGQKVLDTGYPIRIPVGAETLGRIINVIGEPIDERGPIDTDKT 146
                 .|...:....:.|:||.:||.....|     |.|.           .|:...||      
Human   680 -----AEEPWKNQLSNSTQGLHKGQSSHSAG-----PNGE-----------RPLSSTGP------ 717

  Fly   147 AAIHAEA-----------PEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIM 200
             :.|.:|           |.....||.|                          ||.:.      
Human   718 -SQHLQAAGSGIQNQNGHPTLPSNSVTQ--------------------------GAALN------ 749

  Fly   201 ELINNVAKAHGGYSVFAGVGERTREGNDLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGARARV 265
            .|.::.|.:.|            ::|..|..|....|.|....:||:      ...|.|.:.|.|
Human   750 HLSSHTATSGG------------QQGITLTKESKPSGNILTVPETSR------HTGETPNSTASV 796

  Fly   266 --------ALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALL-GRIPSAVGYQPTLATD 321
                    .:|...|............||..||        .::|||| |:..:.||   |...|
Human   797 EGLPNHVHQMTADAVCSPSHGDSKSPGLLSSDN--------PQLSALLMGKANNNVG---TGTCD 850

  Fly   322 -MGSMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLS-----------RAIAE 374
             :.::...:.|....|:.|..:   .|.....|:|.:|    :.||..|           ..|..
Human   851 KVNNIHPAVHTKTDNSVASSPS---SAISTATPSPKST----EQTTTNSVTSLNSPHSGLHTING 908

  Fly   375 LGIYPAVDPLDSTSRIMD----PNIIGQEHYNVARGVQKILQDYKSLQDIIAILGMDELSE---- 431
            .|:..:..|:.:...:::    |.||.....::.....::|:..::       ||.:.||.    
Human   909 EGMEESQSPMKTDLLLVNHKPSPQIIPSMSVSIYPSSAEVLKACRN-------LGKNGLSNSSIL 966

  Fly   432 ------------------EDKL-----TVARARK-------IQRFLSQPFQVAEVFTGHAGKLVP 466
                              :|||     ::....|       :.:|.:.|.....|..|.||.| .
Human   967 LDKCPPPRPPSSPYPPLPKDKLNPPTPSIYLENKRDAFFPPLHQFCTNPNNPVTVIRGLAGAL-K 1030

  Fly   467 LEQTIKGFSAILAGDYDHLPEVAFYMVGPIEE 498
            |:..:.....::..:.:|:.||...::.|.:|
Human  1031 LDLGLFSTKTLVEANNEHMVEVRTQLLQPADE 1062

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaNP_001259081.1 PRK09280 44..507 CDD:236447 94/526 (18%)
ATP-synt_ab_N 46..112 CDD:280947 13/66 (20%)
F1-ATPase_beta 114..393 CDD:238553 55/314 (18%)
ATP-synt_ab_C 401..508 CDD:278722 22/132 (17%)
KDM6AXP_011542260.1 TPR repeat 93..121 CDD:276809
TPR 106..399 CDD:223533
TPR repeat 129..159 CDD:276809
TPR_1 130..163 CDD:278916
TPR repeat 164..194 CDD:276809
TPR repeat 205..233 CDD:276809
TPR repeat 243..278 CDD:276809
TPR_17 272..303 CDD:290167
TPR repeat 285..312 CDD:276809
TPR repeat 317..347 CDD:276809
TPR_1 318..351 CDD:278916
TPR repeat 352..378 CDD:276809
JmjC 1151..1215 CDD:214721
JmjC 1185..1293 CDD:202224
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0055
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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