Protein Alignment ATPsynbeta and Jarid2

DIOPT Version :9

• Sequence 1: NP_001259081.1
• Gene: ATPsynbeta / 43829
• FlyBaseID: FBgn0010217
• Length: 511
• Species: Drosophila melanogaster
• Sequence 2: XP_017456196.1
• Gene: Jarid2 / 681740
• RGDID: 1591663
• Length: 1281
• Species: Rattus norvegicus
• Alignment Length: 515
• Identity: 90/515 - (17%)
• Similarity: 150/515 - (29%)
• Gaps: 182/515 - (35%)

  Fly     8 SKADKNLLPFLGQLSTAPFSARSHA---------AKAAKAAAAANGKIVAVIGAVVDVQFDDNLP 63
            :||.:.|:.........|.||.:|.         ||..|...:..|...:...|...::....|.
  Rat   397 TKAKRELVKETKPSHHKPSSAVNHTISGKSESSNAKTRKQVLSLGGASTSTAPAASGLKASSRLN 461

  Fly    64 PILNALEVDN-------RSPRLVLEVAQHLGENTVRTIAMDGTEGLVR----------GQKVLDT 111
            |.....||..       |:.:..||.||.:.:.......|.||.|:..          |:|.|..
  Rat   462 PKSCTKEVGGRQLREGLRNSKRRLEEAQQVDKQQSPPKKMKGTAGIAEAPGRKASAASGEKSLLN 526

  Fly   112 GY--------------PIRIPVGAETLGRIIN--VIGEPIDERGPIDTDKTAAIHAEAPEFVQMS 160
            |:              |.|...|...||:..:  ..|.|.:.|.....:.:...|
  Rat   527 GHVKKEVPERSLERNRPKRAAAGKNMLGKQAHGKSEGTPCENRSTSQPESSHKPH---------- 581

  Fly   161 VEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTRE 225
                            .|..|..|       |.||:               |::....:......
  Rat   582 ----------------DPQGKPEK-------GSGKS---------------GWAAMDEIPVLRPS 608

  Fly   226 GNDLYNEMIEGGVISLKDKTSKVALVYG--QMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFI 288
            ..:.::.:|.  :.|::.:..|    ||  ::..||..|....|              .|.:.|:
  Rat   609 AKEFHDPLIY--IESVRAQVEK----YGMCRVIPPPDWRPECKL--------------NDEMRFV 653

  Fly   289 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERITTTKKGSITSVQAIYVPADDLT-D 352
            ..|....:.|..                     .|...:|:...||         ::.:..:| |
  Rat   654 TQIQHIHKLGRR---------------------WGPNVQRLACIKK---------HLRSQGITMD 688

  Fly   353 PAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKILQDYKSL 417
            ..|......||..... |.|.|:|....|..|...:::.|                 :|:..|:.
  Rat   689 ELPLIGGCELDLACFF-RLINEMGGMQQVTDLKKWNKLAD-----------------MLRIPKTA 735

  Fly   418 QDIIA---------ILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLE 468
            ||.:|         :|..|.||.|:.      |::::.:....::.|...|      |||
  Rat   736 QDRLAKLQEAYCQYLLSYDSLSPEEH------RRLEKEVLMEKEILEKRKG------PLE 783

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ATPsynbeta	NP_001259081.1	PRK09280	44..507	CDD:236447	80/470 (17%)
		ATP-synt_ab_N	46..112	CDD:280947	17/82 (21%)
		F1-ATPase_beta	114..393	CDD:238553	44/283 (16%)
		ATP-synt_ab_C	401..508	CDD:278722	16/77 (21%)
Jarid2	XP_017456196.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0055
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900