DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbeta and atp5f1b

DIOPT Version :9

Sequence 1:NP_001259081.1 Gene:ATPsynbeta / 43829 FlyBaseID:FBgn0010217 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001001256.1 Gene:atp5f1b / 407968 XenbaseID:XB-GENE-943110 Length:525 Species:Xenopus tropicalis


Alignment Length:514 Identity:444/514 - (86%)
Similarity:463/514 - (90%) Gaps:9/514 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ALRAASKADKNLLPFLGQ--LSTAPFSARSHAAKAAKAAAAAN-----GKIVAVIGAVVDVQFDD 60
            ||||...|...:.  |||  |..:|.:..|....||:.:|||.     |:||||||||||||||:
 Frog    12 ALRALKPASNPVQ--LGQNLLRCSPAALHSRRDYAAQTSAAAKPGTAVGRIVAVIGAVVDVQFDE 74

  Fly    61 NLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGYPIRIPVGAETLG 125
            .||||||||||..|..||||||||||||||||||||||||||||||||||.|.|||||||.||||
 Frog    75 GLPPILNALEVQGRDTRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDAGTPIRIPVGPETLG 139

  Fly   126 RIINVIGEPIDERGPIDTDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGG 190
            ||:|||||||||||||.|.:.|||||||||||:||||||||||||||||||||||||||||||||
 Frog   140 RIMNVIGEPIDERGPITTKQFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGG 204

  Fly   191 AGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYNEMIEGGVISLKDKTSKVALVYGQM 255
            ||||||||||||||||||||||||||||||||||||||||:||||.|||:|||.|||||||||||
 Frog   205 AGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDTTSKVALVYGQM 269

  Fly   256 NEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAT 320
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   270 NEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAT 334

  Fly   321 DMGSMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLD 385
            |||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   335 DMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLD 399

  Fly   386 STSRIMDPNIIGQEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQP 450
            ||||||||||:|.|||.||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   400 STSRIMDPNIVGLEHYEVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQP 464

  Fly   451 FQVAEVFTGHAGKLVPLEQTIKGFSAILAGDYDHLPEVAFYMVGPIEEVVEKADRLAKE 509
            ||||||||||.||||||:.|||||..||.|.||:|||.||||||||||.|.||::||:|
 Frog   465 FQVAEVFTGHLGKLVPLKDTIKGFKQILHGGYDNLPEQAFYMVGPIEEAVTKAEKLAEE 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaNP_001259081.1 PRK09280 44..507 CDD:236447 425/462 (92%)
ATP-synt_ab_N 46..112 CDD:280947 59/65 (91%)
F1-ATPase_beta 114..393 CDD:238553 266/278 (96%)
ATP-synt_ab_C 401..508 CDD:278722 92/106 (87%)
atp5f1bNP_001001256.1 PRK09280 55..521 CDD:236447 425/465 (91%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 420 1.000 Domainoid score I634
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H1273
Inparanoid 1 1.050 832 1.000 Inparanoid score I446
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D278669at33208
OrthoFinder 1 1.000 - - FOG0001822
OrthoInspector 1 1.000 - - oto102268
Panther 1 1.100 - - LDO PTHR15184
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1349
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.160

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