DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATPsynbeta and JARID2

DIOPT Version :9

Sequence 1:NP_001259081.1 Gene:ATPsynbeta / 43829 FlyBaseID:FBgn0010217 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_011512881.1 Gene:JARID2 / 3720 HGNCID:6196 Length:1309 Species:Homo sapiens


Alignment Length:503 Identity:94/503 - (18%)
Similarity:162/503 - (32%) Gaps:156/503 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SKADKNLLPFLGQLSTAPFSARSH--AAKAAKAAAAANGKIVAVIGAVVDVQFDDNLPPILNALE 70
            :||.:.|:.........|.||.:|  :.|...:.|....:::::.||      ..:..|.:|.|:
Human   413 TKAKRELVKDTKPNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGA------SKSTGPAVNGLK 471

  Fly    71 VDNR-SPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGYPIRIPVGAETLGRIINVIGEP 134
            |..| :|:   ...:.:|...:|. .:...|||...::.|:..:....|                
Human   472 VSGRLNPK---SCTKEVGGRQLRE-GLQLREGLRNSKRRLEEAHQAEKP---------------- 516

  Fly   135 IDERGPIDTDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLI 199
               :.|....|.||..||.|              |.|     ||..:    ||..| .|.|.|..
Human   517 ---QSPPKKMKGAAGPAEGP--------------GKK-----APAER----GLLNG-HVKKEVPE 554

  Fly   200 MELINNVAK------------AHGGYSVFAGVGERTREGNDLYNEMIEGGVISLKDKTSKVALVY 252
            ..|..|..|            |||.....:.....|.:...::.....|     |.:.......:
Human   555 RSLERNRPKRATAGKSTPGRQAHGKADSASCENRSTSQPESVHKPQDSG-----KAEKGGGKAGW 614

  Fly   253 GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIP-------- 309
            ..|:|.|..|...             :|..|.|::|:::    :|..|...:...||        
Human   615 AAMDEIPVLRPSA-------------KEFHDPLIYIESV----RAQVEKFGMCRVIPPPDWRPEC 662

  Fly   310 ---------SAVGYQPTLATDMGSMQERITTTKKGSITSVQAIYVPADDLT-DPAPATTFAHLDA 364
                     :.:.:...|....|...:|:...||         ::.:..:| |..|......||.
Human   663 KLNDEMRFVTQIQHIHKLGRRWGPNVQRLACIKK---------HLKSQGITMDELPLIGGCELDL 718

  Fly   365 TTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKILQDYKSLQDIIA------- 422
            .... |.|.|:|....|..|...:::.|                 :|:..::.||.:|       
Human   719 ACFF-RLINEMGGMQQVTDLKKWNKLAD-----------------MLRIPRTAQDRLAKLQEAYC 765

  Fly   423 --ILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLE 468
              :|..|.||.|:.      |::::.:....::.|...|      |||
Human   766 QYLLSYDSLSPEEH------RRLEKEVLMEKEILEKRKG------PLE 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaNP_001259081.1 PRK09280 44..507 CDD:236447 85/465 (18%)
ATP-synt_ab_N 46..112 CDD:280947 14/66 (21%)
F1-ATPase_beta 114..393 CDD:238553 55/308 (18%)
ATP-synt_ab_C 401..508 CDD:278722 15/77 (19%)
JARID2XP_011512881.1 JmjN 619..660 CDD:128818 11/57 (19%)
BRIGHT 686..777 CDD:128777 23/117 (20%)
JmjC 979..1094 CDD:202224
zf-C5HC2 1202..1255 CDD:280996
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0055
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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