DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbeta and Utx

DIOPT Version :9

Sequence 1:NP_001259081.1 Gene:ATPsynbeta / 43829 FlyBaseID:FBgn0010217 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_609368.3 Gene:Utx / 34377 FlyBaseID:FBgn0260749 Length:1136 Species:Drosophila melanogaster


Alignment Length:460 Identity:82/460 - (17%)
Similarity:144/460 - (31%) Gaps:157/460 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 AMDGTEGLVRGQKVLDTGYPIRIPVGAETLGRI------INVIGEPIDERGPIDTDKTAAIHAEA 153
            |.||.|.|:..:.       |.:.:.|:...::      :..:||. .||           .|.|
  Fly   246 AKDGYEFLLNEKN-------ISLELKADVYRQLGWMYHCVECLGEK-KER-----------EANA 291

  Fly   154 PEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG 218
            ..|:|.|:|              |....|..:.|.|....|           :.|.|..:..:..
  Fly   292 LNFLQKSIE--------------ADPKSGQSLYLLGRCYAG-----------INKVHDAFLAYRN 331

  Fly   219 VGERTREGNDLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGARA------------RVALTGLT 271
            ..|:: |||              .|....:.::|.|.|:|..|..            :.|.|.|.
  Fly   332 SVEKS-EGN--------------ADTWCSIGVLYQQQNQPTDALQAYICAVQLDKDHKAAWTNLG 381

  Fly   272 VAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERIT------ 330
            :. |....:.:|......|..:  |...:.|:|:.:..:....:.|:....| :.:|||      
  Fly   382 IL-YESCGQLRDAYACYLNATK--QISFQKSSLIRKKQAIRMKKDTIGLSKG-LSQRITFLEGQL 442

  Fly   331 --------TTKKGSITSVQAIY-----------------------VPADDLTDPAPATTFAHLDA 364
                    |:|:..:.|::..:                       .....:..|.|....:.|..
  Fly   443 SQAPLPSITSKRRQLCSIEEAWNLPISLEMNSRQQQTAQMLPRQVTKQSPVQGPPPPYPHSQLSQ 507

  Fly   365 TTVLSRAIAELGIYPAVDPLDSTSRIMDPNII------GQEHYNV-----ARGVQKILQD----- 413
            :.:.|:.|.|.|. ...:...:.|:....|:|      .|.::|.     ....|.:|..     
  Fly   508 SPIPSKRIKEDGT-SQQEVTQNNSQTSAQNLINISESLNQRNFNAMPESNKSSEQSVLDTFDDIS 571

  Fly   414 ---YKSLQDI-IAILGMDELSEE----------DKLTVARARKIQRFLSQPFQVAEVFTGHAGKL 464
               ||..:.| :..|..|.||..          |...::...||| ..|:...||.       ||
  Fly   572 NDIYKQNESIKLERLSQDALSNNEDSRHDFIGGDNADISTTFKIQ-MDSKQLMVAV-------KL 628

  Fly   465 VPLEQ 469
            :|:::
  Fly   629 LPIDE 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaNP_001259081.1 PRK09280 44..507 CDD:236447 82/460 (18%)
ATP-synt_ab_N 46..112 CDD:280947 5/16 (31%)
F1-ATPase_beta 114..393 CDD:238553 54/333 (16%)
ATP-synt_ab_C 401..508 CDD:278722 20/93 (22%)
UtxNP_609368.3 TPR repeat 147..181 CDD:276809
TPR_11 156..216 CDD:290150
TPR repeat 186..216 CDD:276809
TPR repeat 228..255 CDD:276809 5/8 (63%)
TPR_11 264..337 CDD:290150 19/110 (17%)
TPR repeat 265..300 CDD:276809 10/46 (22%)
TPR repeat 307..334 CDD:276809 5/37 (14%)
TPR_11 339..402 CDD:290150 13/77 (17%)
TPR repeat 339..369 CDD:276809 7/43 (16%)
TPR_1 340..373 CDD:278916 6/32 (19%)
TPR repeat 374..402 CDD:276809 6/28 (21%)
JmjC 870..978 CDD:202224
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0055
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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