DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbeta and atp2

DIOPT Version :9

Sequence 1:NP_001259081.1 Gene:ATPsynbeta / 43829 FlyBaseID:FBgn0010217 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_593151.1 Gene:atp2 / 2541927 PomBaseID:SPAC222.12c Length:525 Species:Schizosaccharomyces pombe


Alignment Length:502 Identity:382/502 - (76%)
Similarity:425/502 - (84%) Gaps:10/502 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LPFLGQLSTAPFSARSHAAKAAKAAAAANGKIVAVIGAVVDVQFD--DNLPPILNALEV---DNR 74
            ||....|:||.|:...:|  :.:||....|.|..|||||||.||:  |:||.|||||||   ||:
pombe    28 LPRKSWLNTAKFNTIRYA--STEAAKHNKGSIKQVIGAVVDCQFEDADSLPSILNALEVKLPDNK 90

  Fly    75 SPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGYPIRIPVGAETLGRIINVIGEPIDERG 139
              |||||||||:|||||||||||||||||||..|:|||.||.||||..|||||:||||||:||||
pombe    91 --RLVLEVAQHVGENTVRTIAMDGTEGLVRGTAVIDTGSPISIPVGPGTLGRIMNVIGEPVDERG 153

  Fly   140 PIDTDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELIN 204
            ||...|.:.|||:||.|.:.|...|||.|||||||||||||:||||||||||||||||.|.||||
pombe   154 PIKAVKYSPIHADAPSFEEQSTTPEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELIN 218

  Fly   205 NVAKAHGGYSVFAGVGERTREGNDLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTG 269
            |:||||||||||.|||||||||||||.||.|.|||.|:.: ||.|||:|||||||||||||||||
pombe   219 NIAKAHGGYSVFTGVGERTREGNDLYREMQETGVIKLEGE-SKAALVFGQMNEPPGARARVALTG 282

  Fly   270 LTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERITTTKK 334
            |||||||||.||||||||||||||||||||||||||||||||||||||||||||:||||||||||
pombe   283 LTVAEYFRDIEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERITTTKK 347

  Fly   335 GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQE 399
            ||||||||:|||||||||||||||||||||||||||:|:|||||||||||||.||:|||.|:|:|
pombe   348 GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSISELGIYPAVDPLDSKSRMMDPRILGEE 412

  Fly   400 HYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKL 464
            |||:|..||::||:||||||||||||||||||.|||||.||||:||||||||.|||||||..|:|
pombe   413 HYNLAGSVQQMLQEYKSLQDIIAILGMDELSEADKLTVERARKVQRFLSQPFAVAEVFTGIEGRL 477

  Fly   465 VPLEQTIKGFSAILAGDYDHLPEVAFYMVGPIEEVVEKADRLAKEAA 511
            |.|:.||:.|..||.|.:|.|||.||||||.|::.|:||:::|:|.|
pombe   478 VSLKDTIRSFKEILEGKHDSLPESAFYMVGSIDDAVKKAEKIAQELA 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaNP_001259081.1 PRK09280 44..507 CDD:236447 370/467 (79%)
ATP-synt_ab_N 46..112 CDD:280947 52/70 (74%)
F1-ATPase_beta 114..393 CDD:238553 236/278 (85%)
ATP-synt_ab_C 401..508 CDD:278722 73/106 (69%)
atp2NP_593151.1 PRK09280 53..520 CDD:236447 370/469 (79%)
ATP-synt_ab_N 57..126 CDD:280947 52/70 (74%)
F1-ATPase_beta 128..406 CDD:238553 236/278 (85%)
ATP-synt_ab_C 414..523 CDD:278722 74/108 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 388 1.000 Domainoid score I121
eggNOG 1 0.900 - - E1_COG0055
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1273
Inparanoid 1 1.050 712 1.000 Inparanoid score I97
OMA 1 1.010 - - QHG62497
OrthoFinder 1 1.000 - - FOG0001822
OrthoInspector 1 1.000 - - oto100446
orthoMCL 1 0.900 - - OOG6_100608
Panther 1 1.100 - - LDO PTHR15184
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R118
SonicParanoid 1 1.000 - - X1349
TreeFam 1 0.960 - -
1413.860

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