DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbeta and jmjd-3.2

DIOPT Version :9

Sequence 1:NP_001259081.1 Gene:ATPsynbeta / 43829 FlyBaseID:FBgn0010217 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_510405.1 Gene:jmjd-3.2 / 181543 WormBaseID:WBGene00009089 Length:867 Species:Caenorhabditis elegans


Alignment Length:199 Identity:38/199 - (19%)
Similarity:62/199 - (31%) Gaps:66/199 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 TTTKKGSITSVQAIYVPADDLTD----------PAPATTFAHLDATTVLSRAIAELGIYPAVDPL 384
            ::|:....|.....|..|:|.:|          ..||..|...|.||:...|..:       :..
 Worm    76 SSTEPSGTTISSGNYEIAEDCSDETEQFIDPDNQVPAANFITNDCTTIEQTAKIQ-------EES 133

  Fly   385 DSTSRIMDPNIIGQEHYNVARGVQKILQDYKSLQDI---IAILGMDELSEEDKLTVARARKIQRF 446
            .:.|.|:..|..|..:       ::||....:..|.   |.|.|.|::.:               
 Worm   134 GTDSLIVSTNDSGSTN-------EQILPTQSNDADFRERIEIDGRDQVDQ--------------- 176

  Fly   447 LSQPFQVAEVFTGHAGKLVPLEQTIKGFSAILAGDYDHLPEVAFYMVGPI-----EEVVEKADRL 506
                         |.....|    |.|.::.|.....|  |...::|||.     |.::|...:.
 Worm   177 -------------HGNSYPP----ISGNNSKLRKSESH--EQGEFLVGPSRKRKPETLIETKSKK 222

  Fly   507 AKEA 510
            .|.|
 Worm   223 RKSA 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaNP_001259081.1 PRK09280 44..507 CDD:236447 36/194 (19%)
ATP-synt_ab_N 46..112 CDD:280947
F1-ATPase_beta 114..393 CDD:238553 15/72 (21%)
ATP-synt_ab_C 401..508 CDD:278722 19/114 (17%)
jmjd-3.2NP_510405.1 COG5644 40..>191 CDD:227931 28/160 (18%)
JmjC 577..641 CDD:214721
JmjC 611..719 CDD:334913
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0055
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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