DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbeta and atp-2

DIOPT Version :9

Sequence 1:NP_001259081.1 Gene:ATPsynbeta / 43829 FlyBaseID:FBgn0010217 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_498111.2 Gene:atp-2 / 175716 WormBaseID:WBGene00000229 Length:538 Species:Caenorhabditis elegans


Alignment Length:511 Identity:426/511 - (83%)
Similarity:459/511 - (89%) Gaps:4/511 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ALRAAS-KADKNLLPFLGQLSTAPFSARSHAAK--AAKAAAA-ANGKIVAVIGAVVDVQFDDNLP 63
            ||.||| :...|.:.....:.|...:.::.||.  :|||.|| |:|:||||||||||||||:|||
 Worm    25 ALPAASIRLSSNNVESKKGIHTGVATQQAAAATKVSAKATAANASGRIVAVIGAVVDVQFDENLP 89

  Fly    64 PILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGYPIRIPVGAETLGRII 128
            ||||.|||..|||||:|||:||||:|.||.|||||||||||||.|.|||.||:||||.||||||:
 Worm    90 PILNGLEVVGRSPRLILEVSQHLGDNVVRCIAMDGTEGLVRGQPVADTGDPIKIPVGPETLGRIM 154

  Fly   129 NVIGEPIDERGPIDTDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGV 193
            |||||||||||||.:...|||||||||||:|||||||||||||||||||||||||||||||||||
 Worm   155 NVIGEPIDERGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGV 219

  Fly   194 GKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYNEMIEGGVISLKDKTSKVALVYGQMNEP 258
            |||||||||||||||||||||||||||||||||||||:||||||||.||.|.|||:|||||||||
 Worm   220 GKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIEGGVIDLKGKNSKVSLVYGQMNEP 284

  Fly   259 PGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 323
            |||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Worm   285 PGARARVCLTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG 349

  Fly   324 SMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTS 388
            |||||||||||||||||||||||||||||||||||||||||||||||.||||.||||||||||||
 Worm   350 SMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELAIYPAVDPLDSTS 414

  Fly   389 RIMDPNIIGQEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQV 453
            ||||||::||.||::||||||||||||||||||||||||||||||||||:|||||||||||||||
 Worm   415 RIMDPNVVGQNHYDIARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQV 479

  Fly   454 AEVFTGHAGKLVPLEQTIKGFSAILAGDYDHLPEVAFYMVGPIEEVVEKADRLAKE 509
            |||||||.||.|.||:||:||:.||.|:.||||||||||.|.|::|.:||:.|||:
 Worm   480 AEVFTGHQGKFVSLEETIRGFTMILKGELDHLPEVAFYMQGGIDDVFKKAEELAKQ 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaNP_001259081.1 PRK09280 44..507 CDD:236447 408/462 (88%)
ATP-synt_ab_N 46..112 CDD:280947 54/65 (83%)
F1-ATPase_beta 114..393 CDD:238553 261/278 (94%)
ATP-synt_ab_C 401..508 CDD:278722 85/106 (80%)
atp-2NP_498111.2 PRK09280 67..533 CDD:236447 409/465 (88%)
ATP-synt_ab_N 72..138 CDD:280947 54/65 (83%)
F1-ATPase_beta 140..419 CDD:238553 261/278 (94%)
ATP-synt_ab_C 427..535 CDD:278722 86/107 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164626
Domainoid 1 1.000 414 1.000 Domainoid score I337
eggNOG 1 0.900 - - E1_COG0055
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1273
Inparanoid 1 1.050 813 1.000 Inparanoid score I245
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62497
OrthoDB 1 1.010 - - D278669at33208
OrthoFinder 1 1.000 - - FOG0001822
OrthoInspector 1 1.000 - - oto17463
orthoMCL 1 0.900 - - OOG6_100608
Panther 1 1.100 - - LDO PTHR15184
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R118
SonicParanoid 1 1.000 - - X1349
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.840

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