DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynbeta and Atp5f1b

DIOPT Version :9

Sequence 1:NP_001259081.1 Gene:ATPsynbeta / 43829 FlyBaseID:FBgn0010217 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_599191.1 Gene:Atp5f1b / 171374 RGDID:621368 Length:529 Species:Rattus norvegicus


Alignment Length:518 Identity:447/518 - (86%)
Similarity:470/518 - (90%) Gaps:11/518 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ALRAASKADKNLLPF--LGQ----LSTAP---FSARSHAAK--AAKAAAAANGKIVAVIGAVVDV 56
            |..:||.|.:.|.|.  |.|    |.|||   ..||.:||:  ||..|..|.|:|||||||||||
  Rat     9 ASASASGALRGLNPLAALPQAHLLLRTAPAGVHPARDYAAQSSAAPKAGTATGQIVAVIGAVVDV 73

  Fly    57 QFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGYPIRIPVGA 121
            |||:.||||||||||..|..||||||||||||:|||||||||||||||||||||:|.||:||||.
  Rat    74 QFDEGLPPILNALEVQGRESRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGP 138

  Fly   122 ETLGRIINVIGEPIDERGPIDTDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIG 186
            ||||||:|||||||||||||.|.:.|.||||||||::||||||||||||||||||||||||||||
  Rat   139 ETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKGGKIG 203

  Fly   187 LFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYNEMIEGGVISLKDKTSKVALV 251
            ||||||||||||||||||||||||||||||||||||||||||||:||||.|||:|||.|||||||
  Rat   204 LFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALV 268

  Fly   252 YGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 316
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   269 YGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 333

  Fly   317 TLATDMGSMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAV 381
            |||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   334 TLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAV 398

  Fly   382 DPLDSTSRIMDPNIIGQEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRF 446
            ||||||||||||||:|.|||:|||||||||||||||||||||||||||||||||||:||||||||
  Rat   399 DPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRF 463

  Fly   447 LSQPFQVAEVFTGHAGKLVPLEQTIKGFSAILAGDYDHLPEVAFYMVGPIEEVVEKADRLAKE 509
            ||||||||||||||.||||||::|||||..|||||||||||.||||||||||.|.|||:||:|
  Rat   464 LSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGDYDHLPEQAFYMVGPIEEAVAKADKLAEE 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynbetaNP_001259081.1 PRK09280 44..507 CDD:236447 424/462 (92%)
ATP-synt_ab_N 46..112 CDD:280947 58/65 (89%)
F1-ATPase_beta 114..393 CDD:238553 263/278 (95%)
ATP-synt_ab_C 401..508 CDD:278722 95/106 (90%)
Atp5f1bNP_599191.1 PRK09280 58..524 CDD:236447 425/465 (91%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350547
Domainoid 1 1.000 420 1.000 Domainoid score I621
eggNOG 1 0.900 - - E1_COG0055
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1273
Inparanoid 1 1.050 840 1.000 Inparanoid score I421
OMA 1 1.010 - - QHG62497
OrthoDB 1 1.010 - - D278669at33208
OrthoFinder 1 1.000 - - FOG0001822
OrthoInspector 1 1.000 - - oto95527
orthoMCL 1 0.900 - - OOG6_100608
Panther 1 1.100 - - LDO PTHR15184
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1349
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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