DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and RCK2

DIOPT Version :9

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_013349.1 Gene:RCK2 / 850950 SGDID:S000004238 Length:610 Species:Saccharomyces cerevisiae


Alignment Length:481 Identity:136/481 - (28%)
Similarity:210/481 - (43%) Gaps:135/481 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 YDIKEELGKGAFSIVKRCV-QKSTGFEF--------AAKII-----------NTKKLTARDFQKL 58
            |.:..::|:||||.|.|.: .|::..||        |.|:|           :.||...:|..|.
Yeast   163 YKLINKIGEGAFSKVFRAIPAKNSSNEFLTKNYKAVAIKVIKKADLSSINGDHRKKDKGKDSTKT 227

  Fly    59 EREARICRK--LHH------PNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASH 115
            ....::.::  ||.      ..||...|..:.::|:|::.:|:||||:|.:||...::||..:.|
Yeast   228 SSRDQVLKEVALHKTVSAGCSQIVAFIDFQETDSYYYIIQELLTGGEIFGEIVRLTYFSEDLSRH 292

  Fly   116 CIQQILESVNHCHQNGVVHRDLKPENLLL-------------------ASKA-KG---------- 150
            .|:|:..:|.|.|..||||||:||||||.                   .:|| :|          
Yeast   293 VIKQLALAVKHMHSLGVVHRDIKPENLLFEPIEFTRSIKPKLRKSDDPQTKADEGIFTPGVGGGG 357

  Fly   151 -AAVKLADFGLAIEVQGDHQAWFGFA-------GTPGYLSPEVLKKEPYGKSVDIWACGVILYIL 207
             ..||||||||:.::         |:       ||.||.:|||:|.|.|...||:|..|.:||.:
Yeast   358 IGIVKLADFGLSKQI---------FSKNTKTPCGTVGYTAPEVVKDEHYSMKVDMWGIGCVLYTM 413

  Fly   208 LVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKRITAAEALKHPWI 272
            |.|:|||:||....|..:|..|.|.:..|.||.::..|||.:.::|.:.|:||....:.|..||:
Yeast   414 LCGFPPFYDEKIDTLTEKISRGEYTFLKPWWDEISAGAKNAVAKLLELEPSKRYDIDQFLDDPWL 478

  Fly   273 CQRERVASVVHRQETVDCLKKFNARRKLKGAIL----------------TTML------------ 309
                         .|.|||.|.....:.|....                :::|            
Yeast   479 -------------NTFDCLPKEGESSQKKAGTSERRHPHKKQFQLFQRDSSLLFSPAAVAMRDAF 530

  Fly   310 ----ATRNFSSRSMITKKGEGS--QVKESTDSSSTTLEDDDIKEDK-KGTVDRSTTVVSKEPEDI 367
                |.:......|.|:.|.||  :.:|..||.|....|:.::::. :.|:|.||          
Yeast   531 DIGNAVKRTEEDRMGTRGGLGSLAEDEELEDSYSGAQGDEQLEQNMFQLTLDTST---------- 585

  Fly   368 RILCPAKTYQQN-IGNSQCSSAARRQ 392
             ||...|..|:| :|.:...||..|:
Yeast   586 -ILQRRKKVQENDVGPTIPISATIRE 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 111/354 (31%)
S_TKc 14..272 CDD:214567 104/323 (32%)
CaMKII_AD 390..517 CDD:285524 1/3 (33%)
RCK2NP_013349.1 STKc_RCK1-like 161..478 CDD:270998 104/323 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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