DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and AT1G49580

DIOPT Version :9

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_175381.1 Gene:AT1G49580 / 841382 AraportID:AT1G49580 Length:606 Species:Arabidopsis thaliana


Alignment Length:558 Identity:152/558 - (27%)
Similarity:221/558 - (39%) Gaps:141/558 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FSDNYDIKEELGKGAFSIVKRCVQK-----STGFEFAAKII-NTKKLTARDFQKLEREARICRKL 68
            |....::.||:|:|.|...  |..|     ..|...|.||| .:|..||...:.:.||.:|.:.|
plant   146 FHSRVELGEEIGRGHFGYT--CSAKFKKGELKGQVVAVKIIPKSKMTTAIAIEDVRREVKILQAL 208

  Fly    69 H-HPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILESVNHCHQNG 131
            . |.|:|:.:|:.::....|:..:|..||||.:.|:|| ..|||.||...|.|||..|..||..|
plant   209 SGHKNLVQFYDAFEDNANVYIAMELCEGGELLDRILARGGKYSENDAKPVIIQILNVVAFCHFQG 273

  Fly   132 VVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSVD 196
            ||||||||||.|..||.:.:.:|..||||:..|:.|.:. ....|:..|::||||.:. |....|
plant   274 VVHRDLKPENFLYTSKEENSQLKAIDFGLSDFVRPDERL-NDIVGSAYYVAPEVLHRS-YTTEAD 336

  Fly   197 IWACGVILYILLVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKRI 261
            :|:.|||.||||.|..|||...:..::..:......:..|.|..::.:||:.:.::|..:|.:|:
plant   337 VWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEPPWPFLSSDAKDFVKRLLFKDPRRRM 401

  Fly   262 TAAEALKHPWICQRERVASVVHRQETVDCLKKFNARRKLKGAILTTMLATRNFSSRSMITKKGEG 326
            :|::||.||||                   :.:|....:...||.         .|.|.......
plant   402 SASQALMHPWI-------------------RAYNTDMNIPFDILI---------FRQMKAYLRSS 438

  Fly   327 SQVKESTDSSSTTLEDDDIKEDKKGTVDRSTTVVSKEPEDIRILCPAKTYQQNIGNSQCSSAARR 391
            |..|.:..:.|.||..|:|...|               ....:|.|.|.....:...:.:.|:..
plant   439 SLRKAALRALSKTLIKDEILYLK---------------TQFSLLAPNKDGLITMDTIRMALASNA 488

  Fly   392 QEIIKITEQLIEAINSGDFDGYTKICDPHLTAFEPEAL----GNLVEGIDFHKFYFENVLGKNCK 452
            .|.:|  |..|                       ||.|    |....|:||.:|         |.
plant   489 TEAMK--ESRI-----------------------PEFLALLNGLQYRGMDFEEF---------CA 519

  Fly   453 AINTTILNPHVHLLGEEAAC------IAYVRLTQYIDKQG---------------------HAHT 490
            |    .:|.|.|   |...|      .||    :..||.|                     |:..
plant   520 A----AINVHQH---ESLDCWEQSIRHAY----ELFDKNGNRAIVIEELASELGVGPSIPVHSVL 573

  Fly   491 HQSEETRVWHKR-DNKWQNVHFHR---SASAKISGATT 524
            |.      |.:. |.|.....|.:   ..|.:.||.||
plant   574 HD------WIRHTDGKLSFFGFVKLLHGVSVRASGKTT 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 100/298 (34%)
S_TKc 14..272 CDD:214567 97/265 (37%)
CaMKII_AD 390..517 CDD:285524 30/161 (19%)
AT1G49580NP_175381.1 S_TKc 151..412 CDD:214567 97/264 (37%)
STKc_CAMK 151..411 CDD:270687 96/263 (37%)
FRQ1 452..592 CDD:227455 38/205 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 227 1.000 Domainoid score I670
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 234 1.000 Inparanoid score I1119
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm971
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X46
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.060

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