DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and Dclk1

DIOPT Version :9

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_038959175.1 Gene:Dclk1 / 83825 RGDID:68437 Length:756 Species:Rattus norvegicus


Alignment Length:359 Identity:132/359 - (36%)
Similarity:194/359 - (54%) Gaps:30/359 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PAACTRFSDNYDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTARDFQKLEREARICRKL 68
            ||..|   :.|.:...:|.|.|::||.|:::||..|:|.|||...|...:: ..::.|..|.|::
  Rat   399 PATIT---ERYKVGRTIGDGNFAVVKECIERSTAREYALKIIKKSKCRGKE-HMIQNEVSILRRV 459

  Fly    69 HHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHQNGVV 133
            .|||||.|.:.:......|||.:||.||:||:.|.:...|:|.|||..:..:..::.:.|...:|
  Rat   460 KHPNIVLLIEEMDVPTELYLVMELVKGGDLFDAITSTSKYTERDASGMLYNLASAIKYLHSLNIV 524

  Fly   134 HRDLKPENLLLASKAKGA-AVKLADFGLAIEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSVDI 197
            |||:||||||:.....|: ::||.|||||..|.|   ..:...|||.|::||::.:..||..|||
  Rat   525 HRDIKPENLLVYEHQDGSKSLKLGDFGLATIVDG---PLYTVCGTPTYVAPEIIAETGYGLKVDI 586

  Fly   198 WACGVILYILLVGYPPF--WDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKR 260
            ||.|||.||||.|:|||  ..:||..|:.||..|..|:|||.||.|:..||.|||.||.||.::|
  Rat   587 WAAGVITYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELINMMLLVNVDQR 651

  Fly   261 ITAAEALKHPWICQRERVASVVHRQETVDCLKK-FNARRKLKG-AILTTMLATRNFSSRSMITKK 323
            .:|.:.|:|||: ..:.:....|:......:|| ||...|... |...:::||........:.::
  Rat   652 FSAVQVLEHPWV-NDDGLPENEHQLSVAGKIKKHFNTGPKPSSTAAGVSVIATTALDKERQVFRR 715

  Fly   324 GEGSQVK--------------ESTD---SSSTTL 340
            .....|:              ||.|   |||.|:
  Rat   716 RRNQDVRGRYKAQPAPPELNSESEDYSPSSSETV 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 118/295 (40%)
S_TKc 14..272 CDD:214567 111/260 (43%)
CaMKII_AD 390..517 CDD:285524
Dclk1XP_038959175.1 DCX1_DCLK1 55..143 CDD:340660
DCX2 182..265 CDD:340589
STKc_DCKL1 399..666 CDD:271085 115/274 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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