DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and AT5G24430

DIOPT Version :9

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_197831.3 Gene:AT5G24430 / 832514 AraportID:AT5G24430 Length:594 Species:Arabidopsis thaliana


Alignment Length:303 Identity:98/303 - (32%)
Similarity:161/303 - (53%) Gaps:23/303 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FSDNYDIKEELGKGAFSIVKRCVQKSTGFEF-----AAKIINTKKLTAR-DFQKLEREARICRKL 68
            |...|::.:|:|:|.|.  ..|..|:...:.     |.|||:..|:|:. ..:.:.||.::.:.|
plant   139 FEGKYELGKEVGRGHFG--HTCWAKAKKGKMKNQTVAVKIISKAKMTSTLSIEDVRREVKLLKAL 201

  Fly    69 H-HPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILESVNHCHQNG 131
            . |.::|:.:|..::.:..::|.:|..||||.:.|:|| ..|.|.||...:.|||.:....|..|
plant   202 SGHRHMVKFYDVYEDADNVFVVMELCEGGELLDRILARGGRYPEVDAKRILVQILSATAFFHLQG 266

  Fly   132 VVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSVD 196
            ||||||||||.|..|:.:.|.:|:.||||:..::.| |......|:..|::||||.:. |....|
plant   267 VVHRDLKPENFLFTSRNEDAILKVIDFGLSDFIRYD-QRLNDVVGSAYYVAPEVLHRS-YSTEAD 329

  Fly   197 IWACGVILYILLVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKRI 261
            :|:.|||.||||.|..||:...:..::..:.....::....|.:::|.||:.:.::|..:..||:
plant   330 MWSIGVISYILLCGSRPFYGRTESAIFRCVLRANPNFEDMPWPSISPTAKDFVKRLLNKDHRKRM 394

  Fly   262 TAAEALKHPWICQRERVASVVHRQETVDCLKKFNARRKLKGAI 304
            |||:||.|||:           |.|....|..|:..:.:|..|
plant   395 TAAQALAHPWL-----------RDENPGLLLDFSVYKLVKSYI 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 96/298 (32%)
S_TKc 14..272 CDD:214567 90/265 (34%)
CaMKII_AD 390..517 CDD:285524
AT5G24430NP_197831.3 STKc_CAMK 142..404 CDD:270687 89/265 (34%)
S_TKc 143..405 CDD:214567 90/265 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 227 1.000 Domainoid score I670
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 234 1.000 Inparanoid score I1119
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm971
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X46
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.060

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