DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CaMKII and CPK4

DIOPT Version :9

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_192695.1 Gene:CPK4 / 826541 AraportID:AT4G09570 Length:501 Species:Arabidopsis thaliana


Alignment Length:483 Identity:158/483 - (32%)
Similarity:232/483 - (48%) Gaps:85/483 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PAACTRFSDNYDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTAR-DFQKLEREARICRK 67
            |....|..|:|.:.::||:|.|.....|.:||:...:|.|.|..:||..| |::.:.||.:|...
plant    15 PYETPRLRDHYLLGKKLGQGQFGTTYLCTEKSSSANYACKSIPKRKLVCREDYEDVWREIQIMHH 79

  Fly    68 L-HHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHQNG 131
            | .|||:||:..:.::..:.::|.::..|||||:.||::..:||.:|:..|:.||..|..||..|
plant    80 LSEHPNVVRIKGTYEDSVFVHIVMEVCEGGELFDRIVSKGCFSEREAAKLIKTILGVVEACHSLG 144

  Fly   132 VVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSVD 196
            |:||||||||.|..|.:..|.:|..||||::..: ..|..:...|:|.|::|||||| .||..:|
plant   145 VMHRDLKPENFLFDSPSDDAKLKATDFGLSVFYK-PGQYLYDVVGSPYYVAPEVLKK-CYGPEID 207

  Fly   197 IWACGVILYILLVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKRI 261
            :|:.||||||||.|.||||.|.:..::.||..|..|:.|..|.|::..||:||.:||..:|.|||
plant   208 VWSAGVILYILLSGVPPFWAETESGIFRQILQGKIDFKSDPWPTISEGAKDLIYKMLDRSPKKRI 272

  Fly   262 TAAEALKHPWICQRERVASVVHRQETVDCLKKFNARRKLKGAILTTMLATRNFSSRSMITKKGEG 326
            :|.|||.||||...............:..||:|:...|:|      .:|.|..:.|   ..:.|.
plant   273 SAHEALCHPWIVDEHAAPDKPLDPAVLSRLKQFSQMNKIK------KMALRVIAER---LSEEEI 328

  Fly   327 SQVKE-----STDSSST---------------TLEDDDIKE-------DKKGTVDRSTTVVSKEP 364
            ..:||     .||:|.|               .|.:.:||.       |..||:|          
plant   329 GGLKELFKMIDTDNSGTITFEELKAGLKRVGSELMESEIKSLMDAADIDNSGTID---------- 383

  Fly   365 EDIRILCPAKTYQQNIGNSQCSSAARRQEIIKITEQLIEAINSGDFD--GYTKI----------- 416
                       |.:.:..:...:...|:      |.|:.|.:..|.|  ||..|           
plant   384 -----------YGEFLAATLHINKMERE------ENLVVAFSYFDKDGSGYITIDELQQACTEFG 431

  Fly   417 -CDPHLTAFEPEA-LGNLVEG-IDFHKF 441
             ||..|.....|. |.|  :| |||.:|
plant   432 LCDTPLDDMIKEIDLDN--DGKIDFSEF 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 118/292 (40%)
S_TKc 14..272 CDD:214567 110/259 (42%)
CaMKII_AD 390..517 CDD:285524 20/68 (29%)
CPK4NP_192695.1 STKc_CAMK 24..282 CDD:270687 109/259 (42%)
PTZ00184 319..461 CDD:185504 36/171 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 227 1.000 Domainoid score I670
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 234 1.000 Inparanoid score I1119
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm971
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X46
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

Return to query results.
Submit another query.