DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CaMKII and CPK16

DIOPT Version :9

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_179379.1 Gene:CPK16 / 816299 AraportID:AT2G17890 Length:571 Species:Arabidopsis thaliana


Alignment Length:410 Identity:124/410 - (30%)
Similarity:210/410 - (51%) Gaps:52/410 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FSDNYDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTAR-DFQKLEREARICRKL-HHPN 72
            |...|.|.:.||.|.|........|.||...|.|.|:..|:|.. ..:.::||.:|.:.| .|.|
plant   104 FDHRYTIGKLLGHGQFGYTYVATDKKTGDRVAVKKIDKAKMTIPIAVEDVKREVKILQALTGHEN 168

  Fly    73 IVRLHDSIQEENYHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESVNHCHQNGVVHR 135
            :||.:::.:::|..|:|.:|..||||.:.|:||:  .|||.||:..::|:|:....||..|:|||
plant   169 VVRFYNAFEDKNSVYIVMELCEGGELLDRILARKDSRYSERDAAVVVRQMLKVAAECHLRGLVHR 233

  Fly   136 DLKPENLLLASKAKGAAVKLADFGLAIEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSVDIWAC 200
            |:||||.|..|..:.:.:|..||||:..:: ..:.:....|:..|::|||||:.. |...|:|:.
plant   234 DMKPENFLFKSTEEDSPLKATDFGLSDFIK-PGKKFHDIVGSAYYVAPEVLKRRS-GPESDVWSI 296

  Fly   201 GVILYILLVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKRITAAE 265
            |||.||||.|..||||:.:..::.::.....|:....|.|::..||:.:.::|..:|..|:|||:
plant   297 GVISYILLCGRRPFWDKTEDGIFKEVLKNKPDFRRKPWPTISNSAKDFVKKLLVKDPRARLTAAQ 361

  Fly   266 ALKHPWICQRERVASVVHRQETVDCLKKFNARRKLKGAILTTMLATRNFSSRSMITKKGEGSQVK 330
            ||.|||:.:....:.:     .:|.....|.|:.:|.:.|      :.|:.|::.|...|    :
plant   362 ALSHPWVREGGDASEI-----PIDISVLNNMRQFVKFSRL------KQFALRALATTLDE----E 411

  Fly   331 ESTDSSSTTLED--DDIKEDKKGTVDRSTTVVSKEPEDIRILCPAKTYQQNIGNSQCSSAARRQE 393
            |..|     |.|  |.|..||.|.:..         |::| ...||.:...:.:::.:       
plant   412 ELAD-----LRDQFDAIDVDKNGVISL---------EEMR-QALAKDHPWKLKDARVA------- 454

  Fly   394 IIKITEQLIEAINSGDFDGY 413
                  ::::||:| :.||:
plant   455 ------EILQAIDS-NTDGF 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 100/294 (34%)
S_TKc 14..272 CDD:214567 95/261 (36%)
CaMKII_AD 390..517 CDD:285524 5/24 (21%)
CPK16NP_179379.1 STKc_CAMK 107..367 CDD:270687 94/261 (36%)
S_TKc 108..368 CDD:214567 95/261 (36%)
PTZ00184 404..549 CDD:185504 20/97 (21%)
EFh 415..476 CDD:238008 17/82 (21%)
EFh 496..550 CDD:238008
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 227 1.000 Domainoid score I670
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 234 1.000 Inparanoid score I1119
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm971
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X46
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

Return to query results.
Submit another query.