DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CaMKII and CPK6

DIOPT Version :9

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001324056.1 Gene:CPK6 / 816235 AraportID:AT2G17290 Length:544 Species:Arabidopsis thaliana


Alignment Length:443 Identity:146/443 - (32%)
Similarity:221/443 - (49%) Gaps:55/443 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DNYDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTAR-DFQKLEREARICRKL-HHPNIV 74
            |.|.:..:||:|.|.....|...:||.::|.|.|:.:||.:: |.:.:.||.:|...| .|.|||
plant    83 DLYTLSRKLGQGQFGTTYLCTDIATGVDYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIV 147

  Fly    75 RLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHQNGVVHRDLKP 139
            .:..:.::..|.::|.:|..|||||:.|:.|..|||..|:...:.|:..|..||..||:||||||
plant   148 TIKGAYEDPLYVHIVMELCAGGELFDRIIHRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLKP 212

  Fly   140 ENLLLASKAKGAAVKLADFGLAIEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSVDIWACGVIL 204
            ||.||.:|....::|..||||::..: ..|.:....|:|.|::||||.|. ||...|:|..||||
plant   213 ENFLLVNKDDDFSLKAIDFGLSVFFK-PGQIFKDVVGSPYYVAPEVLLKH-YGPEADVWTAGVIL 275

  Fly   205 YILLVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKRITAAEALKH 269
            ||||.|.||||.|.|..::..:..|..|:.:..|..::..||:||.:||..:|::|:||.|.|:|
plant   276 YILLSGVPPFWAETQQGIFDAVLKGYIDFDTDPWPVISDSAKDLIRKMLCSSPSERLTAHEVLRH 340

  Fly   270 PWICQ------RERVASVVHRQETVDCLKKFNARRKLKG---------------AILTTMLATRN 313
            ||||:      |....:|:.|      ||:|:|..|||.               |.|..|....:
plant   341 PWICENGVAPDRALDPAVLSR------LKQFSAMNKLKKMALKVIAESLSEEEIAGLRAMFEAMD 399

  Fly   314 FSSRSMITKKGEGSQVKESTDSSSTTLEDDDIKE-------DKKGTVDRS----TTVVSKEPEDI 367
            ..:...||    ..::|.......:||:|.:|::       |..||:|.|    .|:...:.|..
plant   400 TDNSGAIT----FDELKAGLRRYGSTLKDTEIRDLMEAADVDNSGTIDYSEFIAATIHLNKLERE 460

  Fly   368 RILCPAKTYQQNIGNSQCSSAARRQEIIK--ITEQLIEAI-------NSGDFD 411
            ..|..|..|....|:...:....:|..|:  :|:..:|.|       |.|..|
plant   461 EHLVSAFQYFDKDGSGYITIDELQQSCIEHGMTDVFLEDIIKEVDQDNDGRID 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 117/313 (37%)
S_TKc 14..272 CDD:214567 103/259 (40%)
CaMKII_AD 390..517 CDD:285524 8/31 (26%)
CPK6NP_001324056.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 227 1.000 Domainoid score I670
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 234 1.000 Inparanoid score I1119
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm971
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X46
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.970

Return to query results.
Submit another query.