DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and camk1db

DIOPT Version :9

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001074127.2 Gene:camk1db / 791176 ZFINID:ZDB-GENE-070112-1872 Length:392 Species:Danio rerio


Alignment Length:345 Identity:138/345 - (40%)
Similarity:205/345 - (59%) Gaps:15/345 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 YDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTARDFQKLEREARICRKLHHPNIVRLHD 78
            ::.||.||.||||.|....:|:||..:|.|.|..|.|..:: ..:|.|..:.||:.|.|||.|.|
Zfish    24 FEFKEILGTGAFSEVVLAQEKATGDMYAVKCIPKKALRGKE-SGIENEIAVLRKIKHENIVALED 87

  Fly    79 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHQNGVVHRDLKPENLL 143
            ..:..::.||:..||:|||||:.||.|.||:|.|||..|:|:|::||:.|..|:|||||||||||
Zfish    88 IYESPSHLYLIMQLVSGGELFDRIVERGFYTEQDASALIKQVLDAVNYLHSLGIVHRDLKPENLL 152

  Fly   144 LASKAKGAAVKLADFGLAIEVQGDHQAWFGFA-GTPGYLSPEVLKKEPYGKSVDIWACGVILYIL 207
            ..:..:.:.:.::||||: :::|........| |||||::||||.::||.|:||.|:.|||.|||
Zfish   153 YFNPHEESKIMISDFGLS-KMEGAANDIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL 216

  Fly   208 LVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKRITAAEALKHPWI 272
            |.|||||:||:..:|:.||....|::.||.||.::..||:.||.::..:|.||.|..|||:||||
Zfish   217 LCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFINNLMQKDPEKRFTCDEALRHPWI 281

  Fly   273 CQRERVASVVHRQETVDCLKKFNARRKLKGAILTTMLATRNFSSRSMITKKGEGSQVKESTDSSS 337
            .....:...:|...:....|.| |:.|.:.|          |::.::| :.....|:..|.|||.
Zfish   282 AGDTALCKNIHESVSRQMKKNF-AKAKWRQA----------FNATAVI-RHMRRLQLGSSMDSSQ 334

  Fly   338 TTLEDDDIKEDKKGTVDRST 357
            ...::......|..:||.|:
Zfish   335 HRKQNPTSMPGKSQSVDVSS 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 126/289 (44%)
S_TKc 14..272 CDD:214567 119/258 (46%)
CaMKII_AD 390..517 CDD:285524
camk1dbNP_001074127.2 STKc_CaMKI 20..280 CDD:270985 118/257 (46%)
S_TKc 24..281 CDD:214567 119/258 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X46
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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