DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and pnck

DIOPT Version :9

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_021334045.1 Gene:pnck / 567480 ZFINID:ZDB-GENE-081105-127 Length:333 Species:Danio rerio


Alignment Length:329 Identity:126/329 - (38%)
Similarity:189/329 - (57%) Gaps:21/329 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 YDIKEELGKGAFSIVK----RCVQKSTGFEFAAKIINTKKLTARDFQKLEREARICRKLHHPNIV 74
            |::||:||:|:||.|:    ||.||..    |.|.|..:.|..:: ..||.|..:.|:::|.|||
Zfish    17 YELKEKLGEGSFSEVRVAQHRCTQKLV----AVKCIRKRALKGKE-SMLENEVAVLRRINHENIV 76

  Fly    75 RLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHQNGVVHRDLKP 139
            .|.::.:.....|||..|:|||||...|:.|..|:|.|||..|.|:|::|.:.||.|||||||||
Zfish    77 SLEETFETPTKLYLVMTLLTGGELLNRILERGSYTEKDASRVIYQVLQAVKYLHQLGVVHRDLKP 141

  Fly   140 ENLLLASKAKGAAVKLADFGLA-IEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSVDIWACGVI 203
            |||:..:..:.:.:.::||||: :|.||   |.....|||.|::||:|:::.|||.||:||.|||
Zfish   142 ENLIFETPLEDSKIVISDFGLSKMEEQG---ALSTACGTPAYVAPELLQQKTYGKEVDLWAIGVI 203

  Fly   204 LYILLVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKRITAAEALK 268
            .:|||.|||||:|::..:||..|....|::.||.|:.::..||:.|..:|..:|.||....:|.:
Zfish   204 TFILLCGYPPFYDDNDTQLYKLIIKAEYEFDSPYWNDISDSAKDFIVHLLQKDPAKRFNCEQASQ 268

  Fly   269 HPWICQRERVASVVHRQETVDCLKKFNARRKLKGAILTTMLATRNFSSRSMITKKGEGSQVKEST 333
            ||||.....:...:|...:....|.| |:...|.|...|::...       :|||....:..|..
Zfish   269 HPWISGGAALDRNIHGSVSAQIQKNF-AKSHWKRAFNATIIVHH-------LTKKAHPGEDDEGN 325

  Fly   334 DSSS 337
            .|:|
Zfish   326 QSTS 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 118/293 (40%)
S_TKc 14..272 CDD:214567 111/262 (42%)
CaMKII_AD 390..517 CDD:285524
pnckXP_021334045.1 PKc_like 13..289 CDD:328722 114/279 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X46
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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