DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and camk1a

DIOPT Version :9

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_021332939.1 Gene:camk1a / 555945 ZFINID:ZDB-GENE-131120-147 Length:394 Species:Danio rerio


Alignment Length:371 Identity:138/371 - (37%)
Similarity:207/371 - (55%) Gaps:26/371 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TRFSDNYDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTARDFQKLEREARICRKLHHPN 72
            |...:|||.||.||.||||.|....:|.|....|.|.|..|.|..:: ..:|.|..:..::.|.|
Zfish    15 TDIKENYDFKEVLGTGAFSEVFLAEEKKTQRLVAIKCIPKKALEGKE-NSIENEIAVLHRIKHEN 78

  Fly    73 IVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHQNGVVHRDL 137
            ||.|.|..:.:::.|||..||:|||||:.||.:.||:|.|||..|:|||::|.:.|..|:|||||
Zfish    79 IVSLEDIFESQSHLYLVMQLVSGGELFDRIVEKGFYTERDASKLIRQILDAVKYLHDMGIVHRDL 143

  Fly   138 KPENLLLASKAKGAAVKLADFGLAIEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSVDIWACGV 202
            ||||||..|..:.:.:.::||||: :::..........|||||::||||.::||.|:||.|:.||
Zfish   144 KPENLLYYSMEEDSNIMISDFGLS-KIEDSGSVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV 207

  Fly   203 ILYILLVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKRITAAEAL 267
            |.||||.|||||:||:..:|:.||....|::.||.||.::..||:.|:.::..:|:.|.|..:||
Zfish   208 ISYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFISHLMEKDPSLRYTCEQAL 272

  Fly   268 KHPWICQRERVASVVHRQETVDCLKKFNARRKLKGAILTTMLATRNFSSRSMITKKGEG-SQVKE 331
            .||||.....:...:|...:....|.| |:.|.|.|...|  |......|..::...|| ||:..
Zfish   273 LHPWISGDTALDKNIHESVSAQIKKNF-AKSKWKQAFNAT--AVVRHMRRLQLSTSLEGPSQITS 334

  Fly   332 ST------------DSSSTTLEDDDIKED--------KKGTVDRST 357
            ::            |......|:::.:|:        ::|:.||.:
Zfish   335 TSPYRHLLLPAKELDQRDEEEEEEEEEEENGSPSVDGRRGSADRDS 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 123/290 (42%)
S_TKc 14..272 CDD:214567 114/257 (44%)
CaMKII_AD 390..517 CDD:285524
camk1aXP_021332939.1 STKc_CaMKI 17..276 CDD:270985 114/260 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X46
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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