DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and camk1

DIOPT Version :9

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001016269.1 Gene:camk1 / 549023 XenbaseID:XB-GENE-1017139 Length:383 Species:Xenopus tropicalis


Alignment Length:382 Identity:136/382 - (35%)
Similarity:204/382 - (53%) Gaps:21/382 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DNYDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTARDFQKLEREARICRKLHHPNIVRL 76
            |.|:.:|.||.||||.|....:|.|....|.|.|..|.|..:: ..:|.|..:.||:.|.|||.|
 Frog    19 DIYEFREVLGTGAFSEVVLAEEKKTQKLVAIKCIPKKALEGKE-TSIENEIAVLRKIKHANIVSL 82

  Fly    77 HDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHQNGVVHRDLKPEN 141
            .|..:..::.||:..||:|||||:.||.:.||:|.|||..|:|||::|.:.|..|:|||||||||
 Frog    83 EDIYESRSHLYLIMQLVSGGELFDRIVEKGFYTEKDASQLIKQILDAVKYLHDMGIVHRDLKPEN 147

  Fly   142 LLLASKAKGAAVKLADFGLAIEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSVDIWACGVILYI 206
            ||..|..:.:.:.::||||: :::|.........|||||::||||.::||.|:||.|:.|||.||
 Frog   148 LLYYSIDEDSKIMISDFGLS-KIEGSGSVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 211

  Fly   207 LLVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKRITAAEALKHPW 271
            ||.|||||:||:..:|:.||....|::.||.||.::..||:.|..::..:||||.|..:||:|||
 Frog   212 LLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIQHLMEKDPNKRNTCDQALQHPW 276

  Fly   272 ICQRERVASVVHRQETVDCLKKFNARRKLKGAILTTMLATRNFSSRSMITKKGEGSQVKESTDSS 336
            |.....:...:|...:....|.| |:.:.|.|...|.:.......:...:::|.|.....|....
 Frog   277 IAGDTALDKNIHESVSEQIRKNF-AKSRWKQAFNATAVVRHMRKLQLGTSQEGPGQTTPTSPCHG 340

  Fly   337 STTLEDDDIKEDKKGTVDRSTTVVSKEPEDIRILCPAKTYQQN---IGNSQCSSAAR 390
            :..:..|:               .....|..:..|..|:.:.|   .....|:.:.|
 Frog   341 NLLMPGDN---------------HGSHSESCQDCCSPKSSENNSLAYSTQHCAQSNR 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 124/290 (43%)
S_TKc 14..272 CDD:214567 116/257 (45%)
CaMKII_AD 390..517 CDD:285524 1/1 (100%)
camk1NP_001016269.1 STKc_CaMKI_alpha 17..279 CDD:271069 119/261 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X46
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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