DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and camk1gb

DIOPT Version :9

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_021325441.1 Gene:camk1gb / 393802 ZFINID:ZDB-GENE-040426-1694 Length:486 Species:Danio rerio


Alignment Length:424 Identity:152/424 - (35%)
Similarity:223/424 - (52%) Gaps:47/424 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DNYDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTARDFQKLEREARICRKLHHPNIVRL 76
            |.:|..:.||.||||.|....::.||..||.|.:  ||...||. .||.|..:.||:.|.|:|.|
Zfish    72 DVFDFMDVLGSGAFSEVFMVKERKTGKLFAMKCV--KKKNKRDI-NLENEIAVLRKIKHENVVCL 133

  Fly    77 HDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHQNGVVHRDLKPEN 141
            .|..:...::|||..||:|||||:.|:.|..|||.|||..|:|:||:|::.|.||:|||||||||
Zfish   134 EDFYESRTHYYLVMQLVSGGELFDRILDRGMYSEMDASSVIRQVLEAVSYLHNNGIVHRDLKPEN 198

  Fly   142 LLLASKAKGAAVKLADFGLAIEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSVDIWACGVILYI 206
            ||..|..:.:.:.::||||:  ...|:.......|||||::||||.::||.|:||.|:.|||.||
Zfish   199 LLYYSPDENSKIMISDFGLS--KMEDNGVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYI 261

  Fly   207 LLVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKRITAAEALKHPW 271
            ||.|||||::|.:.||:|:|..|.|::.||.||.::..||:.|..|:..||..|....:||:|||
Zfish   262 LLCGYPPFYEETETRLFSKIMKGQYEFDSPFWDDISESAKDFIRNMMQKNPKMRFNTEQALRHPW 326

  Fly   272 ICQRERVASVVHRQETVDCLKKFNARRKLKGAILTTMLATRNFSSRSMITKKGEGSQVKESTDSS 336
            |..:...:..::...:....|.| |:.|.|.|...|:....        .||     ::::...:
Zfish   327 IIGKTARSQDIYHSVSEQMQKNF-AKSKWKQAFNATVAINH--------MKK-----LQQAHSEA 377

  Fly   337 STTLEDD--DIKEDKKGTVDRSTTVVSKEPEDIRILCPAKTYQQNIG-NSQCSSAARRQE----- 393
            ...|:|.  |:.|.|        .:.|..||.:|....::|.:.|.. |..|.|...:.:     
Zfish   378 CVRLKDSPRDVPEIK--------VIASSTPESVRKKLLSETPEPNGSMNVPCGSTEAKSQYHPMR 434

  Fly   394 ----------IIKITEQLIEAINS--GDFDGYTK 415
                      .:.|.|:.....:|  .|.:||.|
Zfish   435 VSHSETTHVGTLTIAEKGKHVYHSEPADLNGYAK 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 127/290 (44%)
S_TKc 14..272 CDD:214567 119/257 (46%)
CaMKII_AD 390..517 CDD:285524 7/43 (16%)
camk1gbXP_021325441.1 PKc_like 70..353 CDD:328722 125/286 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X46
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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