DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and camk1ga

DIOPT Version :9

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_956260.1 Gene:camk1ga / 335654 ZFINID:ZDB-GENE-030131-7594 Length:426 Species:Danio rerio


Alignment Length:308 Identity:128/308 - (41%)
Similarity:185/308 - (60%) Gaps:20/308 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CT------RFSDNYDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTARDFQKLEREARIC 65
            ||      ...:.:|.||.||.|:||.|....::.:|..:|.|.:..|:|   ....||.|.::.
Zfish     8 CTWKKSTNNIKEIFDFKEVLGSGSFSEVYLVRERKSGNFYALKCVKKKQL---HHSNLENEIQVL 69

  Fly    66 RKLHHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHQN 130
            :::.|.|:|.|.|..:...::|||.:||:|||||:.|:.|..|:|.|||..|.|:||:|::.|||
Zfish    70 KRIKHSNVVGLEDFYESRTHYYLVMELVSGGELFDRILDRGVYTEKDASRVINQVLEAVSYLHQN 134

  Fly   131 GVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSV 195
            .:|||||||||||..|..:.|.:.::||||:  ...||.......|||||::||||.::||.|:|
Zfish   135 SIVHRDLKPENLLYYSPDENAKIMISDFGLS--KMSDHGVMSTACGTPGYVAPEVLAQKPYSKAV 197

  Fly   196 DIWACGVILYILLVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKR 260
            |.|:.|||.||||.|||||::|::.||:|:|....|.:.||.||.::..||:.|..||..||:||
Zfish   198 DCWSIGVITYILLSGYPPFYEENETRLFSKIMKAEYAFHSPYWDDISESAKDFIRHMLEKNPSKR 262

  Fly   261 ITAAEALKHPWICQRERVASVVHRQETV----DCLKKFNARRKLKGAI 304
            .|..:||.||||     :....|....:    :.::|..|:.|.|.||
Zfish   263 YTTEQALSHPWI-----IGDTAHNDNIIHSVCEQIQKNFAKSKWKRAI 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 124/294 (42%)
S_TKc 14..272 CDD:214567 117/257 (46%)
CaMKII_AD 390..517 CDD:285524
camk1gaNP_956260.1 STKc_CaMKI_gamma 17..300 CDD:271068 122/292 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X46
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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