DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and Mylk

DIOPT Version :9

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001099344.2 Gene:Mylk / 288057 RGDID:1310915 Length:1961 Species:Rattus norvegicus


Alignment Length:508 Identity:148/508 - (29%)
Similarity:251/508 - (49%) Gaps:71/508 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RFSDNYDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTARDFQKLEREARICRKLHHPNI 73
            :.||.|||:|.||.|.|..|.|.|:|.||..:|.|..  |..:|::.:.:.:|..|...||||.:
  Rat  1502 KVSDVYDIEERLGSGKFGQVFRLVEKRTGKIWAGKFF--KAYSAKEKENIRQEISIMNCLHHPKL 1564

  Fly    74 VRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCI---QQILESVNHCHQNGVVHR 135
            |:..|:.:|:....:|.::|:||||||.|:..:|  |.....||   :||.|.|.:.|:.|:||.
  Rat  1565 VQCVDAFEEKANIVMVLEIVSGGELFERIIDEDF--ELTERECIKYMRQISEGVEYIHKQGIVHL 1627

  Fly   136 DLKPENLLLASKAKGAAVKLADFGLA--IEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSVDIW 198
            ||||||::..:|. |..:||.|||||  :|..|..:..|   |||.:::|||:..||.|.:.|:|
  Rat  1628 DLKPENIMCVNKT-GTRIKLIDFGLARRLENAGSLKVLF---GTPEFVAPEVINYEPIGYATDMW 1688

  Fly   199 ACGVILYILLVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKRITA 263
            :.|||.|||:.|..||..::.:...:.:.:..:|:....:|.::.:||:.|:.:|..:...|:..
  Rat  1689 SIGVICYILVSGLSPFMGDNDNETLANVTSATWDFDDEAFDEISEDAKDFISNLLKKDMKNRLDC 1753

  Fly   264 AEALKHPWICQRERVASVVHRQETVDCLKKFNARRKLK--GAILTTMLATRNFSSRSMITKKGEG 326
            .:.|:|||:.:..:  ::..::.:.|.:||:.||||.:  |   ..:.|....||.:||:..   
  Rat  1754 TQCLQHPWLMKDTK--NMEAKKLSKDRMKKYMARRKWQKTG---NAVRAIGRLSSMAMISGL--- 1810

  Fly   327 SQVKESTDSSSTTLEDDDIKEDKKGTVDRSTTVVSKEPEDIRILCPAKTYQQNIGNSQCSSAARR 391
            |..|.||.|.::.:..:.::.::..:......|..::|.       .|.|        .|...|.
  Rat  1811 SGRKSSTGSPTSPINAEKLESEEDVSQAFLEAVAEEKPH-------VKPY--------FSKTIRD 1860

  Fly   392 QEIIKITEQLIEAINSGDFDGYTKICDPHLTAFEPEALGNLVEGIDFHKFYFE---------NVL 447
            .|:::.:....:.    ..:||.   ||.:..|:.:.  ::.|...|...|.|         :|.
  Rat  1861 LEVVEGSAARFDC----KIEGYP---DPEVVWFKDDQ--SIRESRHFQIDYDEDGNCSLIISDVC 1916

  Fly   448 GKN-----CKAINTTILNPHVHLLGEEAACIAYVRLTQYIDKQGHAHTHQSEE 495
            |.:     |||:|:         || ||.|.|.:.:....:.:|.....:.||
  Rat  1917 GDDDAKYTCKAVNS---------LG-EATCTAELIVETMEEGEGEEGGEEEEE 1959

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 105/297 (35%)
S_TKc 14..272 CDD:214567 96/262 (37%)
CaMKII_AD 390..517 CDD:285524 26/120 (22%)
MylkNP_001099344.2 I-set 42..132 CDD:254352
Ig 64..129 CDD:143165
I-set 165..254 CDD:254352
Ig 183..251 CDD:143165
23ISL 255..408 CDD:293226
I-set 410..500 CDD:254352
Ig 427..497 CDD:143165
I-set 510..596 CDD:254352
IGc2 523..586 CDD:197706
I-set 619..708 CDD:254352
Ig 636..704 CDD:143165
I-set 717..805 CDD:254352
Ig 720..805 CDD:299845
I-set 1141..1230 CDD:254352
IGc2 1154..1220 CDD:197706
Ig 1281..1378 CDD:299845
I-set 1281..1370 CDD:254352
FN3 1374..1465 CDD:238020
STKc_MLCK1 1504..1762 CDD:271093 98/265 (37%)
Pkinase 1507..1762 CDD:278497 96/262 (37%)
I-set 1852..1942 CDD:254352 25/116 (22%)
IGc2 1865..1932 CDD:197706 15/84 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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