DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and caska

DIOPT Version :10

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_017213110.1 Gene:caska / 259195 ZFINID:ZDB-GENE-020802-4 Length:965 Species:Danio rerio


Alignment Length:606 Identity:191/606 - (31%)
Similarity:290/606 - (47%) Gaps:113/606 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FSDNYDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTAR---DFQKLEREARICRKLHHP 71
            |.|.|::.|.:|||.||:|:||:.:.||.:||.||::..|.|:.   ..:.|:|||.||..|.||
Zfish     8 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHP 72

  Fly    72 NIVRLHDSIQEENYHYLVFDLVTGGELFEDIVARE----FYSEADASHCIQQILESVNHCHQNGV 132
            :||.|.::...:...|:||:.:.|.:|..:||.|.    .||||.|||.::||||::.:||.|.:
Zfish    73 HIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 137

  Fly   133 VHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSVDI 197
            :|||:||..:|||||...|.|||..||:||::........|..|||.:::|||:|:|||||.||:
Zfish   138 IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDV 202

  Fly   198 WACGVILYILLVGYPPFWDEDQHRLYSQIKAGAYDYPSP-EWDTVTPEAKNLINQMLTVNPNKRI 261
            |.|||||:|||.|..||:. .:.||:..|..|.|...:| :|..::..||:|:.:||.::|.:||
Zfish   203 WGCGVILFILLSGCLPFYG-TKERLFEAIIKGKYKVMNPRQWGHISESAKDLVRRMLMLDPAERI 266

  Fly   262 TAAEALKHPWICQRERVASVVHRQETVDCLKKFNARRKLKGAILTTMLATR-------------N 313
            |..|||.|||:.:|:|.|..:|..|||:.|:|||||||||||:|..:.:.:             :
Zfish   267 TVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAVSSHKFNSFYGDPPEELPD 331

  Fly   314 FS----SRSMITKKGEGSQVKES-------TDSSSTTL-------EDDDIKE-----DKKGTVDR 355
            ||    |..::..:...|||.:|       ||.|...|       :|..:..     ||..|  :
Zfish   332 FSEDPTSSGLLAAERAVSQVLDSLEEIHALTDCSEKDLDFLHSVFQDHHLHTLLDLYDKINT--K 394

  Fly   356 STTVVSKEPEDIRILCPAKTYQQNIGNSQCSSAARRQEIIKITEQLIEAINSGDFDGYTK----- 415
            |:..:.....|      |....:.......||||     :|..|.::|.|:....:...|     
Zfish   395 SSPQIRNPSSD------AVQRAKETSTEDGSSAA-----LKHLEYVLEEISCYPENTDAKELRRI 448

  Fly   416 ICDPHLTAFEPEALGNLVEGIDFHKFYFENVLGKNCKAINTTILNPHVHLLGEEAA-------CI 473
            :..||..|.           :..|......|...:...:.....:|:::....|:.       .:
Zfish   449 LTQPHFMAL-----------LQTHDVVAHEVYSDDAMRVTPPPTSPYLNGDSPESTNGDMDIENV 502

  Fly   474 AYVRLTQY------------------------------IDKQGHAHTHQSEETRVWHKRDNKWQN 508
            ..|||.|:                              |.:||..|.  .:|.|..:......|.
Zfish   503 TRVRLVQFQKNTDEPMGITLKMNDLNHCIVARIMHGGMIHRQGTLHI--GDEIREINGISVANQT 565

  Fly   509 VHFHRSASAKISGATTFDFIP 529
            |...:....::.|:.||..:|
Zfish   566 VEQLQKMLREMRGSITFKIVP 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 137/298 (46%)
CaMKII_AD 390..517 CDD:285524 24/168 (14%)
caskaXP_017213110.1 STKc_CASK 8..308 CDD:270996 138/300 (46%)
L27 349..402 CDD:197794 13/54 (24%)
L27 429..471 CDD:460717 8/52 (15%)
PDZ_CASK-like 506..586 CDD:467267 14/81 (17%)
SH3_CASK 646..707 CDD:213014
Guanylate_kin 768..950 CDD:395500
Blue background indicates that the domain is not in the aligned region.

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