DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and cmk1

DIOPT Version :10

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_593464.1 Gene:cmk1 / 2542442 PomBaseID:SPACUNK12.02C Length:335 Species:Schizosaccharomyces pombe


Alignment Length:319 Identity:121/319 - (37%)
Similarity:176/319 - (55%) Gaps:24/319 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 YDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTAR-DFQKLEREARICRKL--HHPNIVR 75
            |.:...||.|.::.|:..|...|...:||||:|.|.:..: ||.|  .|..|.:::  .||||:.
pombe    31 YRVGRVLGGGTYATVREAVHIETNKMYAAKIMNKKMMEKKQDFVK--NEIAILKRVSYEHPNILH 93

  Fly    76 LHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHQNGVVHRDLKPE 140
            |.|..:..|..||:.:|.||||||:.|.|:..:.||||:..::....:|.:.|.||:||||||||
pombe    94 LVDFFETVNNLYLITELATGGELFDRICAKGSFYEADAAALMRTTTSAVKYLHDNGIVHRDLKPE 158

  Fly   141 NLLLASKAKGAAVKLADFGLAIEVQGDHQAW--FGFAGTPGYLSPEVLKKEPYGKSVDIWACGVI 203
            |||..||...:.:.:|||||: ....|.|.:  ....|||.|::|||.::..|||.||:||.|||
pombe   159 NLLYRSKDPNSDLLIADFGLS-HFYEDSQYYMLMTACGTPEYMAPEVFRRTGYGKPVDMWAIGVI 222

  Fly   204 LYILLVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKRITAAEALK 268
            .|.||.||.||....|..:...|.|..|.:..|.|..::..||:.|.:.|..:|:||:|||:|||
pombe   223 TYFLLSGYTPFARPSQVEVIEAILANEYTFNDPCWSGISETAKDFIKKCLENDPSKRLTAADALK 287

  Fly   269 HPWICQRERVASVVHRQETVDCL----KKFNARRKLKGAILTTMLATRNFSSRSMITKK 323
            ||::.::        |..|.:.|    :.||||:..:    |...|.|.|::...:..|
pombe   288 HPFLSEK--------RPATSNLLPNVRENFNARKTFR----TAYNAVRAFNTWKKLENK 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 116/297 (39%)
CaMKII_AD 390..517 CDD:285524
cmk1NP_593464.1 STKc_CAMK 30..290 CDD:270687 108/261 (41%)
Blue background indicates that the domain is not in the aligned region.

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