DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and chk-2

DIOPT Version :9

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001024271.1 Gene:chk-2 / 180304 WormBaseID:WBGene00000499 Length:476 Species:Caenorhabditis elegans


Alignment Length:304 Identity:100/304 - (32%)
Similarity:154/304 - (50%) Gaps:29/304 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LGKGAFSIVKRCVQKSTGFEFAAKIINTKKLT--------ARDFQKLEREARICRKLHHPNIVRL 76
            ||||.|..|....:||.....|.|.:||:..|        .||   :..|..:.:||.|||||.:
 Worm   176 LGKGGFGKVLLGYKKSDRSVVAIKQLNTQFSTRCSRAIAKTRD---IRNEVEVMKKLSHPNIVAI 237

  Fly    77 HDSIQEENYHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILESVNHCHQNGVVHRDL 137
            :|.|....|.|:|.:.|.|||.|..:|..::    ..|:...:...|:::::.:.|..|:.|||:
 Worm   238 YDWITVAKYSYMVIEYVGGGEFFSKVVDSKYNRMGLGESLGKYFAFQLIDAILYLHSVGICHRDI 302

  Fly   138 KPENLLLASKAKGAAVKLADFGLAIEVQGDHQAWFGFAGTPGYLSPEVLKKE--PYGKSVDIWAC 200
            ||||:|.:.||:...:||.|||:|   :..........|||.|.:||::..|  .|...||||:.
 Worm   303 KPENILCSDKAERCILKLTDFGMA---KNSVNRMKTRCGTPSYNAPEIVANEGVEYTPKVDIWSL 364

  Fly   201 GVILYILLVGYPPFWDE-DQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKRITAA 264
            |.:|:|...|||||.:| ....:..|:..|...:.: :|..:|.|.:|:|..||||.|:.|.:|.
 Worm   365 GCVLFITFSGYPPFSEEYTDMTMDEQVLTGRLIFHA-QWRRITVETQNMIKWMLTVEPSNRPSAV 428

  Fly   265 EALKHPWI-CQRERVASVVHRQETVDCLKKFNARRKLKGAILTT 307
            |.:...|: |...|.|    :|:.:..:|..:|  ....|:.||
 Worm   429 ELMSTQWMKCADCRTA----KQDILKSIKPISA--AAPAALQTT 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 97/298 (33%)
S_TKc 14..272 CDD:214567 90/266 (34%)
CaMKII_AD 390..517 CDD:285524
chk-2NP_001024271.1 STKc_Chk2 162..436 CDD:270986 90/266 (34%)
S_TKc 176..436 CDD:214567 90/266 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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