DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and mnk-1

DIOPT Version :9

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_871924.2 Gene:mnk-1 / 174623 WormBaseID:WBGene00011304 Length:707 Species:Caenorhabditis elegans


Alignment Length:556 Identity:138/556 - (24%)
Similarity:245/556 - (44%) Gaps:115/556 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FSDNYDIKEE-LGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTARDFQKLEREARI---CRKLHH 70
            |.|.|.:.:| ||.||:..|..|....:|.|:|.||:: |:......:::.||..|   |:  .|
 Worm   198 FFDYYKLTDEHLGSGAYGSVTTCKSIKSGVEYAVKIVD-KQGETHSRKRILREVNIFKTCK--DH 259

  Fly    71 PNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHQNGVVHR 135
            ||||:|.|..::|...|||.:.:.||.|.:.|:.|::::|.:|....:.|..::...|..|:.||
 Worm   260 PNIVQLLDWFEDETNFYLVMEKMRGGPLLQHILQRKYFTEEEARRVTKDISLALKFMHDRGIAHR 324

  Fly   136 DLKPENLLLASKAKGAAVKLADFGLAIEVQGDHQA-----------WFGFAGTPGYLSPEV---- 185
            |:||||:|.......:.|||.|..||.:....|:.           .....|:..:::|||    
 Worm   325 DVKPENVLCTDPNHVSPVKLCDLDLASQRPPQHERHPLSQVASEPDLASPVGSAEFMAPEVVDAY 389

  Fly   186 ----LKKEPYGKSVDIWACGVILYILLVGYPPF----------WDED------QHRLYSQIKAGA 230
                ||   |.|..|.|:.||||||:|.||.||          |.|.      |..|:.:|:.|.
 Worm   390 VGDSLK---YDKKCDTWSLGVILYIMLAGYAPFQGMCDDEDCGWSEGKPCEDCQQDLFHRIQDGY 451

  Fly   231 YDYPSPEWDTVTPEAKNLINQMLTVNPNKRITAAEALKHPWICQR------ERVASVVHRQETVD 289
            |::|..||..::.|||:|::.:|..:|..|..|.:.|.|.|:.|.      :..:::::|:::..
 Worm   452 YEFPEEEWGMISEEAKDLVSNLLKRDPVDRFNADQILSHRWLQQSAASTILQTPSNLINRKDSAR 516

  Fly   290 CLKKFNARRKLKGAILTTMLATRNFSSRSMITKKGEGSQVKESTDSSSTTLEDD----DIKEDKK 350
            .:::.:....|...:..|.|:.| |.::..:::.|        :|..:.|:..|    .:..:..
 Worm   517 DVQQMSEHFNLMNRLADTRLSAR-FDNKMTMSECG--------SDLGTATIHGDGSFLSMGGEPF 572

  Fly   351 GTVDRSTTV---VSKEPEDIRILCPAKTYQQNIGNSQCSSAARRQEIIKITEQLIE-------AI 405
            ||..|..:|   :.|          :::.:.....|:.|.......::.::|.|.:       |.
 Worm   573 GTFPRKKSVGIAIEK----------SRSGEFTPPISRASPTTPPPSMLNLSEDLTDSPVKRRSAD 627

  Fly   406 NSGDF--------DGYTKICDPHLTAFEPEALGNLVEGIDFHKFYFENVLGKNCKAINTTILNPH 462
            :||.|        :|...||.|.:...:..::.....|                 |:.|::....
 Worm   628 DSGTFSLFSPASSNGDDSICSPPMVFVDMPSIQLFGTG-----------------ALLTSVQMTP 675

  Fly   463 VHLLGEEAACIAYVRLTQYIDKQGHAHTHQSEETRV 498
            .|...::|:      |..:.|:|.:|:.....||:|
 Worm   676 RHTTEDDAS------LKSFEDEQENANPIHRIETQV 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 100/335 (30%)
S_TKc 14..272 CDD:214567 95/296 (32%)
CaMKII_AD 390..517 CDD:285524 22/124 (18%)
mnk-1NP_871924.2 PKc_like 200..492 CDD:328722 96/297 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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