DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and R06A10.4

DIOPT Version :10

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001380035.1 Gene:R06A10.4 / 171688 WormBaseID:WBGene00019911 Length:391 Species:Caenorhabditis elegans


Alignment Length:343 Identity:107/343 - (31%)
Similarity:181/343 - (52%) Gaps:28/343 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TRFSDNYDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTARDFQKLEREARICRKLHHPN 72
            :|....|::...:|||:||.|.|...:.|...||.|::|      .|...:..|..|..:|.||.
 Worm    65 SRLVCKYEVLAVVGKGSFSQVLRVQHRVTRKYFAVKVVN------GDCGAVNNELNILSRLSHPF 123

  Fly    73 IVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHQNGVVHRDL 137
            ::||.:..:..:..::|..:.:|||:::.:||:..|||.:|.:.::.:|..:.:.|...|.||||
 Worm   124 VIRLEEVFKSSSKLFIVMQMASGGEMYDRVVAKGRYSEEEARNALKMLLTGLTYLHSIRVTHRDL 188

  Fly   138 KPENLLLASKAKGAAVKLADFGLAIEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSVDIWACGV 202
            ||||||.|.....|.:.:.|||||.:....::......|||.|::||:|.:.||.:.||:||.||
 Worm   189 KPENLLYADSRPEARLLITDFGLAYQATKPNETMTETCGTPEYIAPELLLRVPYTQKVDMWAVGV 253

  Fly   203 ILYILLVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKRITAAEAL 267
            |.|||:.|..||.|:.:.|||:.|....|.| .|::.:.:..||..::.:|..|..:|::::.|:
 Worm   254 IAYILMSGIMPFDDDCRSRLYTHIITANYVY-YPQFWSGSELAKQFVDSLLETNSVERLSSSAAM 317

  Fly   268 KHPWICQRERVASVVHRQETVDCLKKFNARRKLKGAILTTMLATRNFSSRSMITKKGEGSQVKES 332
            ||.|: ..||.::...|..|.. ..::|:.::.|        :||:..|   :|:...|.:|...
 Worm   318 KHEWL-TGERPSTTQSRPPTRP-TSEYNSMQRTK--------STRSIRS---VTRSDHGHRVDPR 369

  Fly   333 TDSSSTTLEDDDIKEDKK 350
                    |.|::..|.|
 Worm   370 --------EVDELANDLK 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 96/290 (33%)
CaMKII_AD 390..517 CDD:285524
R06A10.4NP_001380035.1 STKc_PSKH1 69..322 CDD:270989 89/259 (34%)
Blue background indicates that the domain is not in the aligned region.

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