DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CaMKII and Cask

DIOPT Version :10

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_011245733.1 Gene:Cask / 12361 MGIID:1309489 Length:972 Species:Mus musculus


Alignment Length:593 Identity:192/593 - (32%)
Similarity:291/593 - (49%) Gaps:98/593 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FSDNYDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTA---------RDFQKLEREARIC 65
            |.|.|::.|.:|||.||:|:||:.:.||.:||.||::..|.|:         |....|:|||.||
Mouse     8 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEGKRWISNLKREASIC 72

  Fly    66 RKLHHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVARE----FYSEADASHCIQQILESVNH 126
            ..|.||:||.|.::...:...|:||:.:.|.:|..:||.|.    .||||.|||.::||||::.:
Mouse    73 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 137

  Fly   127 CHQNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGDHQAWFGFAGTPGYLSPEVLKKEPY 191
            ||.|.::|||:||..:|||||...|.|||..||:||::........|..|||.:::|||:|:|||
Mouse   138 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPY 202

  Fly   192 GKSVDIWACGVILYILLVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVN 256
            ||.||:|.|||||:|||.|..||:. .:.||:..|..|.|.....:|..::..||:|:.:||.::
Mouse   203 GKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLD 266

  Fly   257 PNKRITAAEALKHPWICQRERVASVVHRQETVDCLKKFNARRKLKGAILTTMLATR--------- 312
            |.:|||..|||.|||:.:|:|.|..:|..|||:.|:|||||||||||:|..:.:.:         
Mouse   267 PAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAVSSHKFNSFYGDPP 331

  Fly   313 ----NFS----SRSMITKKGEGSQVKES-------TDSSSTTL-------EDDDIKE-----DKK 350
                :||    |..::..:...|||.:|       ||.|...|       :|..:..     ||.
Mouse   332 EELPDFSEDPTSSGLLAAERAVSQVLDSLEEIHALTDCSEKDLDFLHSVFQDQHLHTLLDLYDKI 396

  Fly   351 GTVDRSTTVVSKEPEDI-----RILCPAKTYQQNIGNSQCSSAARRQEIIKITEQLIEAINSGDF 410
            .|  :|:..:...|.|.     .:|.....|.:|       :.|:..:.|......:..:.:.|.
Mouse   397 NT--KSSPQIRNPPSDAVQRAKEVLEEISCYPEN-------NDAKELKRILTQPHFMALLQTHDV 452

  Fly   411 DGYTKICD-----------PHLTAFEPE-ALGNL-------VEGIDFHKFYFENVLGKNCKAINT 456
            ..:....|           |:|....|| |.|::       |..:.|.| ..:..:|...|    
Mouse   453 VAHEVYSDEALRVTPPPTSPYLNGDSPESANGDMDMENVTRVRLVQFQK-NTDEPMGITLK---- 512

  Fly   457 TILNPHVHLLGEEAACIAYVRLTQYIDKQGHAHTHQSEETRVWHKRDNKWQNVHFHRSASAKISG 521
              :|...|.:      :|.:.....|.:||..|.  .:|.|..:......|.|...:....::.|
Mouse   513 --MNELNHCI------VARIMHGGMIHRQGTLHV--GDEIREINGISVANQTVEQLQKMLREMRG 567

  Fly   522 ATTFDFIP 529
            :.||..:|
Mouse   568 SITFKIVP 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 137/303 (45%)
CaMKII_AD 390..517 CDD:285524 25/145 (17%)
CaskXP_011245733.1 STKc_CASK 8..313 CDD:270996 138/305 (45%)
L27 354..407 CDD:197794 13/54 (24%)
L27 412..462 CDD:460717 7/56 (13%)
PDZ_CASK-like 495..575 CDD:467267 18/94 (19%)
SH3_CASK 622..683 CDD:213014
Guanylate_kin 744..957 CDD:395500
Blue background indicates that the domain is not in the aligned region.

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