DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and Camk2b

DIOPT Version :9

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_006514527.1 Gene:Camk2b / 12323 MGIID:88257 Length:667 Species:Mus musculus


Alignment Length:661 Identity:393/661 - (59%)
Similarity:443/661 - (67%) Gaps:145/661 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAAPAACTRFSDNYDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTARDFQKLEREARIC 65
            ||....||||:|.|.:.|::||||||:|:|||:..||.|:||||||||||:|||.||||||||||
Mouse     1 MATTVTCTRFTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARIC 65

  Fly    66 RKLHHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHQN 130
            |.|.|.|||||||||.||.:|||||||||||||||||||||:|||||||||||||||:|.||||.
Mouse    66 RLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 130

  Fly   131 GVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSV 195
            |||||||||||||||||.|||||||||||||||||||.||||||||||||||||||:||.|||.|
Mouse   131 GVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPV 195

  Fly   196 DIWACGVILYILLVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKR 260
            |||||||||||||||||||||||||:||.||||||||:|||||||||||||||||||||:||.||
Mouse   196 DIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKR 260

  Fly   261 ITAAEALKHPWICQRERVASVVHRQETVDCLKKFNARRKLKGAILTTMLATRNFS---------- 315
            |||.|||||||:|||..|||::||||||:||||||||||||||||||||||||||          
Mouse   261 ITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLKGAILTTMLATRNFSVGRQTTAPAT 325

  Fly   316 ----------------SRSMITKKGEGSQ------------------------------------ 328
                            ::|::.||.:|.:                                    
Mouse   326 MSTAASGTTMGLVEQAAKSLLNKKADGVKPQTNSTKNSSAITSPKGSLPPAALEPQTTVIHNPVD 390

  Fly   329 -VKESTDSSSTTLEDDDIKEDKKGTVDRSTTVVSKEPE------------------------DI- 367
             :|||:||::||:||:|.|..:...|.......|..||                        || 
Mouse   391 GIKESSDSTNTTIEDEDAKAPRVPDVLSLVRRASGAPEAEGPLSCQSPVPISPLPTPSPRISDIL 455

  Fly   368 --------------------------RILCPAKTYQQNI----------------------GNSQ 384
                                      .:|.|..|....|                      |...
Mouse   456 NSVRRGCGTPEAEGPLSVGPPPCLSPGLLGPLPTPSPRISDILNSVRRGSGTPEAEGLPPVGPPP 520

  Fly   385 CSS---------AARRQEIIKITEQLIEAINSGDFDGYTKICDPHLTAFEPEALGNLVEGIDFHK 440
            |.|         .:|:|||||.|||||||:|:|||:.|.|||||.||:||||||||||||:|||:
Mouse   521 CPSPTLPGPLPTPSRKQEIIKTTEQLIEAVNNGDFEAYAKICDPGLTSFEPEALGNLVEGMDFHR 585

  Fly   441 FYFENVLGKNCKAINTTILNPHVHLLGEEAACIAYVRLTQYIDKQGHAHTHQSEETRVWHKRDNK 505
            |||||:|.||.|.|:|||||||||::||:||||||:|||||||.||...|.|||||||||:||.|
Mouse   586 FYFENLLAKNSKPIHTTILNPHVHVIGEDAACIAYIRLTQYIDGQGRPRTSQSEETRVWHRRDGK 650

  Fly   506 WQNVHFHRSAS 516
            |||||||.|.:
Mouse   651 WQNVHFHCSGA 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 248/290 (86%)
S_TKc 14..272 CDD:214567 222/257 (86%)
CaMKII_AD 390..517 CDD:285524 97/127 (76%)
Camk2bXP_006514527.1 STKc_CaMKII 12..303 CDD:270988 248/290 (86%)
CaMKII_AD 535..662 CDD:285524 97/127 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 476 1.000 Domainoid score I429
eggNOG 1 0.900 - - E1_KOG0033
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 789 1.000 Inparanoid score I513
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52374
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 1 1.000 - - FOG0000706
OrthoInspector 1 1.000 - - otm44116
orthoMCL 1 0.900 - - OOG6_100515
Panther 1 1.100 - - O PTHR24347
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3212
SonicParanoid 1 1.000 - - X46
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.870

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