DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and dcx

DIOPT Version :10

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_004916902.1 Gene:dcx / 100493401 XenbaseID:XB-GENE-992092 Length:360 Species:Xenopus tropicalis


Alignment Length:87 Identity:22/87 - (25%)
Similarity:40/87 - (45%) Gaps:20/87 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 AAKIINTKKLTARDFQK--------LEREARICRKLH---HPNIVRLHDSIQEENYHYLVFDLVT 94
            |.:::..|| ||..|::        ::.|..:.:||:   ...:..|||...|::    || :..
 Frog   194 AVRVLLNKK-TAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLHDFFGEDD----VF-IAC 252

  Fly    95 GGELFEDIVAREFYSEADASHC 116
            |.|.|.  .|::.:| .|.:.|
 Frog   253 GPEKFR--YAQDDFS-LDENEC 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 22/87 (25%)
CaMKII_AD 390..517 CDD:285524
dcxXP_004916902.1 DCX1_DCX 51..139 CDD:340529
DCX2 176..259 CDD:340589 18/72 (25%)
Blue background indicates that the domain is not in the aligned region.

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