DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and camk1d

DIOPT Version :10

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_002935295.2 Gene:camk1d / 100493115 XenbaseID:XB-GENE-5874342 Length:395 Species:Xenopus tropicalis


Alignment Length:375 Identity:140/375 - (37%)
Similarity:207/375 - (55%) Gaps:26/375 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 YDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTARDFQKLEREARICRKLHHPNIVRLHD 78
            :..||.||.||||.|....:|:||..||.|.|..|.|..:: ..:|.|..:.||:.|.|||.|.|
 Frog    24 FQFKEVLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKE-SSIENEIAVLRKIKHENIVALED 87

  Fly    79 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHQNGVVHRDLKPENLL 143
            ..:..::.|||..||:|||||:.||.:.||:|.|||..|:|:|::|::.|:.|:|||||||||||
 Frog    88 IYESPSHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVSYLHRLGIVHRDLKPENLL 152

  Fly   144 LASKAKGAAVKLADFGLAIEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSVDIWACGVILYILL 208
            ..|:.:.:.:.::||||: :::|.........|||||::||||.::||.|:||.|:.|||.||||
 Frog   153 YFSQVEESKIMISDFGLS-KMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 216

  Fly   209 VGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKRITAAEALKHPWIC 273
            .|||||:||:..:|:.||....|::.||.||.::..||:.|..::..:.|||.|..:||:||||.
 Frog   217 CGYPPFYDENDSKLFEQILKADYEFDSPYWDDISESAKDFIQHLMEKDSNKRYTCEQALRHPWIA 281

  Fly   274 QRERVASVVHRQETVDCLKKFNARRKLKGAILTTMLATRNFSSRSMITKKGEGSQVKESTDSSST 338
            ....:...:|...:....|.| |:.|.:.|...|.:...   .|.:.....:.|......:|.::
 Frog   282 GDTALCKNIHESVSAQIRKNF-AKSKWRQAFNATAVVRH---MRKLHLGSSQDSSSVSGGNSPAS 342

  Fly   339 TLEDDDIKEDKKGTVDRSTTVVSKEPEDIRILCPAKTYQQNIGNSQCSSA 388
            .|.|...::|.|.                    |:..|....|.|..|||
 Frog   343 PLPDGTSRKDCKS--------------------PSNPYGFLSGVSSSSSA 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 124/288 (43%)
CaMKII_AD 390..517 CDD:285524
camk1dXP_002935295.2 Protein Kinases, catalytic domain 13..313 CDD:473864 125/291 (43%)
Blue background indicates that the domain is not in the aligned region.

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