DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and mylkl

DIOPT Version :9

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_002935598.3 Gene:mylkl / 100489678 XenbaseID:XB-GENE-923293 Length:855 Species:Xenopus tropicalis


Alignment Length:330 Identity:110/330 - (33%)
Similarity:168/330 - (50%) Gaps:16/330 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FSDNYDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTARDFQKLEREARICRKLHHPNIV 74
            |:|.|...|:||.|.|..|.:..::|||...|.|..  |..|.::.|....|..:..|||||.:|
 Frog   417 FNDFYIQLEKLGMGKFGQVYKLKERSTGKICAGKFF--KARTQKEIQGARVEVELMNKLHHPQLV 479

  Fly    75 RLHDSIQEENYHYLVFDLVTGGELFEDIVAREF-YSEADASHCIQQILESVNHCHQNGVVHRDLK 138
            |...:.||.....:|.:.:.||||||.|||.:| ::|......|.|||..|.:.|...:||.|||
 Frog   480 RCLSAFQEPGRVVMVLEYIAGGELFERIVADDFEHTEVMCVEYICQILNGVAYMHHQSIVHLDLK 544

  Fly   139 PENLLLASKAKGAAVKLADFGLAIEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSVDIWACGVI 203
            |||::..:.... .||:.|||||.|:. .|.......||..:::|||:..||.|.:.|:|:.|||
 Frog   545 PENIICLNTVSN-QVKIIDFGLARELD-PHVPMKVLQGTAEFVAPEVIAFEPVGFTTDMWSLGVI 607

  Fly   204 LYILLVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKRITAAEALK 268
            .||||.|..||...:.......|.:..:|:.......::..||:.:.::|..|...|:||.:||.
 Frog   608 CYILLSGDSPFQGNNDMETMQNITSACWDFDDETNALLSETAKDFVKRLLQKNMRSRLTAVQALD 672

  Fly   269 HPWICQRERVASVVHRQETV--DCLKKFNARRKLKGAILTTMLATRNFSSRSMITKKGEGSQVKE 331
            |||:..:     .|.:.:|:  :.:|||.||:|.:    .|..|....:..::::.|.:.:....
 Frog   673 HPWVQHK-----CVSKTKTLSKERIKKFLARQKWQ----KTGKAVLALNRMALLSAKSDNNTTST 728

  Fly   332 STDSS 336
            .||.|
 Frog   729 HTDGS 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 103/293 (35%)
S_TKc 14..272 CDD:214567 93/258 (36%)
CaMKII_AD 390..517 CDD:285524
mylklXP_002935598.3 Ig 207..297 CDD:416386
Ig strand A' 208..212 CDD:409353
Ig strand B 216..225 CDD:409353
Ig strand C 229..235 CDD:409353
Ig strand C' 238..240 CDD:409353
Ig strand D 246..251 CDD:409353
Ig strand E 255..260 CDD:409353
Ig strand F 268..276 CDD:409353
Ig strand G 279..289 CDD:409353
FN3 293..388 CDD:238020
PKc_like 427..675 CDD:419665 90/251 (36%)
Ig 757..841 CDD:416386
Ig strand A' 759..762 CDD:409353
Ig strand B 766..775 CDD:409353
Ig strand C 780..786 CDD:409353
Ig strand C' 789..791 CDD:409353
Ig strand D 797..802 CDD:409353
Ig strand E 805..813 CDD:409353
Ig strand F 821..828 CDD:409353
Ig strand G 831..841 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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