DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and camkv

DIOPT Version :10

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001119981.1 Gene:camkv / 100144935 XenbaseID:XB-GENE-943904 Length:377 Species:Xenopus tropicalis


Alignment Length:383 Identity:126/383 - (32%)
Similarity:204/383 - (53%) Gaps:45/383 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TRFSDNYDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTARDFQKLEREAR----ICRKL 68
            |..||.||:.:.:....|..|.|..:||:|     |:...|:...||.:|:.:.|:    |.:.:
 Frog    18 TEVSDRYDLGQLIKTEEFCEVFRAKEKSSG-----KLYTCKRFLKRDGRKVRKAAKNEINILKMV 77

  Fly    69 HHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHQNGVV 133
            .|.||::|.|..:....:::..:|.:|.|:|:.|:.:.:|||.|.|:.|:|:||:|.:.|...:|
 Frog    78 KHHNILQLVDVFETRKEYFIFMELASGREVFDWILDQGYYSERDTSNVIRQVLEAVAYLHSLCIV 142

  Fly   134 HRDLKPENLLLASKAKGAAVKLADFGLA-IEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSVDI 197
            ||:||.||||..::.|.:.:.::||.|| :|.....:.   ..|||.||:|||:.::.||:.||.
 Frog   143 HRNLKLENLLYFNRMKNSKIVISDFHLAKVETSSLIKE---PCGTPEYLAPEVVARQRYGRPVDC 204

  Fly   198 WACGVILYILLVGYPPFWDE------DQH--RLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 254
            ||.|||:||||.|.|||:||      :.|  .|:.:|..|.|::.||.||.::|.||:|:.:::.
 Frog   205 WAIGVIMYILLSGNPPFYDELEEEDYESHDKNLFRKILHGDYEFDSPYWDDISPAAKDLVTRLME 269

  Fly   255 VNPNKRITAAEALKHPWICQRERVASVVHRQETVDC--LKKFNARRKLKGAILTTMLATRNFSSR 317
            |..::|:|||:|:.|.||  ....||..:.::.| |  ::|..|:.|.|.|:..|.:..|     
 Frog   270 VEQDQRVTAADAISHEWI--SGNAASDKNIKDGV-CAQIEKNFAKAKWKKAVRVTTMMKR----- 326

  Fly   318 SMITKKGEGSQVKESTDSSSTTLEDDDIKEDKKGTVDRS--TTVVSKEPEDIRILCPA 373
                     .:..|.||..:.:...|..|.....|...|  .|.....|.   :|||:
 Frog   327 ---------LRAPEQTDPGTPSPSKDSDKTPSMATPAPSPANTPAGGAPS---LLCPS 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 109/305 (36%)
CaMKII_AD 390..517 CDD:285524
camkvNP_001119981.1 STKc_CaMK_like 22..287 CDD:270990 99/272 (36%)
Blue background indicates that the domain is not in the aligned region.

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