DRSC/TRiP Functional Genomics Resources

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Protein Alignment CaMKII and camkv

DIOPT Version :9

Sequence 1:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001119981.1 Gene:camkv / 100144935 XenbaseID:XB-GENE-943904 Length:377 Species:Xenopus tropicalis


Alignment Length:383 Identity:126/383 - (32%)
Similarity:204/383 - (53%) Gaps:45/383 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TRFSDNYDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTARDFQKLEREAR----ICRKL 68
            |..||.||:.:.:....|..|.|..:||:|     |:...|:...||.:|:.:.|:    |.:.:
 Frog    18 TEVSDRYDLGQLIKTEEFCEVFRAKEKSSG-----KLYTCKRFLKRDGRKVRKAAKNEINILKMV 77

  Fly    69 HHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHQNGVV 133
            .|.||::|.|..:....:::..:|.:|.|:|:.|:.:.:|||.|.|:.|:|:||:|.:.|...:|
 Frog    78 KHHNILQLVDVFETRKEYFIFMELASGREVFDWILDQGYYSERDTSNVIRQVLEAVAYLHSLCIV 142

  Fly   134 HRDLKPENLLLASKAKGAAVKLADFGLA-IEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSVDI 197
            ||:||.||||..::.|.:.:.::||.|| :|.....:.   ..|||.||:|||:.::.||:.||.
 Frog   143 HRNLKLENLLYFNRMKNSKIVISDFHLAKVETSSLIKE---PCGTPEYLAPEVVARQRYGRPVDC 204

  Fly   198 WACGVILYILLVGYPPFWDE------DQH--RLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 254
            ||.|||:||||.|.|||:||      :.|  .|:.:|..|.|::.||.||.::|.||:|:.:::.
 Frog   205 WAIGVIMYILLSGNPPFYDELEEEDYESHDKNLFRKILHGDYEFDSPYWDDISPAAKDLVTRLME 269

  Fly   255 VNPNKRITAAEALKHPWICQRERVASVVHRQETVDC--LKKFNARRKLKGAILTTMLATRNFSSR 317
            |..::|:|||:|:.|.||  ....||..:.::.| |  ::|..|:.|.|.|:..|.:..|     
 Frog   270 VEQDQRVTAADAISHEWI--SGNAASDKNIKDGV-CAQIEKNFAKAKWKKAVRVTTMMKR----- 326

  Fly   318 SMITKKGEGSQVKESTDSSSTTLEDDDIKEDKKGTVDRS--TTVVSKEPEDIRILCPA 373
                     .:..|.||..:.:...|..|.....|...|  .|.....|.   :|||:
 Frog   327 ---------LRAPEQTDPGTPSPSKDSDKTPSMATPAPSPANTPAGGAPS---LLCPS 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 109/305 (36%)
S_TKc 14..272 CDD:214567 98/270 (36%)
CaMKII_AD 390..517 CDD:285524
camkvNP_001119981.1 STKc_CaMK_like 22..287 CDD:270990 99/272 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X46
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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